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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004158000
- symbol?: rpsU
- synonym:
- description?: 30S ribosomal protein S21
- 30S ribosomal protein S21
- 30S ribosomal protein S21p
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4423660..4423836
- synteny block?: BlockID0031880
- occurrence?: in 100% of 34 strains
rpsU : 30S ribosomal protein S21
Staphylococcal 30S ribosomal protein S21 is also known as "bS21" by the universal ribosomal protein nomenclature harmonization system. [1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1533 (rpsU)
08BA02176:
C248_1618 (rpsU)
11819-97:
MS7_1592 (rpsU)
6850:
RSAU_001440 (rpsU)
71193:
ST398NM01_1641
ECT-R 2:
ECTR2_1425 (rpsU)
ED133:
SAOV_1575 (rpsU)
ED98:
SAAV_1567 (rpsU)
HO 5096 0412:
SAEMRSA15_14950 (rpsU)
JH1:
SaurJH1_1667 (rpsU)
JH9:
SaurJH9_1633 (rpsU)
JKD6008:
SAA6008_01545 (rpsU)
JKD6159:
SAA6159_01510 (rpsU)
JSNZ:
JSNZ_001566 (rpsU)
LGA251:
SARLGA251_14810 (rpsU)
M013:
M013TW_1590
MRSA252:
SAR1652 (rpsU)
MSHR1132:
SAMSHR1132_14150
MSSA476:
SAS1513 (rpsU)
Mu3:
SAHV_1562 (rpsU)
Mu50:
SAV1575 (rpsU)
MW2:
MW1527 (rpsU)
RF122:
SAB1447c (rpsU)
ST398:
SAPIG1641 (rpsU)
T0131:
SAT0131_01671 (folK)
TCH60:
HMPREF0772_11565 (rpsU)
TW20:
SATW20_15710 (rpsU)
USA300_TCH1516:
USA300HOU_1576 (rpsU)
VC40:
SAVC_07125 (rpsU)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
N315 MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
NCTC8325 MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
Newman MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
USA300_FPR3757 MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
**********************************************************
- ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)