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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004134000
- symbol?: sodA
- synonym:
- description?: superoxide dismutase
- superoxide dismutase
- Fe/Mn family superoxide dismutase
- superoxide dismutase, Mn, putative
- superoxide dismutase Mn/Fe family protein
- superoxide dismutase SodA
- Superoxide dismutase [Mn] 1
- Manganese superoxide dismutase
- Superoxide dismutase (Fe)
- superoxide dismutase, Mn
- superoxide dismutase [Mn] (General stress protein 24)(GSP24)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4402806..4403405
- synteny block?: BlockID0031640
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1511 (sodA)
08BA02176:
C248_1596 (sodA)
11819-97:
MS7_1570 (sodA)
6850:
RSAU_001418 (sodA2)
71193:
ST398NM01_1618
ECT-R 2:
ECTR2_1403
ED133:
SAOV_1553
ED98:
SAAV_1545 (sodA2)
HO 5096 0412:
SAEMRSA15_14730 (sodA)
JH1:
SaurJH1_1645
JH9:
SaurJH9_1611
JKD6008:
SAA6008_01522 (sodA)
JKD6159:
SAA6159_01488 (sodA)
LGA251:
SARLGA251_14590 (sodA)
M013:
M013TW_1568
MRSA252:
SAR1630 (sodA)
MSHR1132:
SAMSHR1132_13930
MSSA476:
SAS1491
Mu3:
SAHV_1540 (sodA)
Mu50:
SAV1553 (sodA)
MW2:
MW1505 (sodA)
RF122:
SAB1425c (sodA)
ST398:
SAPIG1618
T0131:
SAT0131_01647 (purR)
TCH60:
HMPREF0772_11587 (sodA2)
TW20:
SATW20_15490 (sodA)
USA300_TCH1516:
USA300HOU_1555 (sodA)
VC40:
SAVC_07015
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
N315 MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
NCTC8325 MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
Newman MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
USA300_FPR3757 MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDLESKSIEEIVANL
************************************************************
COL DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
N315 DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
NCTC8325 DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
Newman DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
USA300_FPR3757 DSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEKIKEQWGSLEEFKKEFADKA
************************************************************
COL AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
N315 AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
NCTC8325 AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
Newman AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
USA300_FPR3757 AARFGSGWAWLVVNNGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIG
************************************************************
COL AFWNVVNWEKVDELYNATK
N315 AFWNVVNWEKVDELYNATK
NCTC8325 AFWNVVNWEKVDELYNATK
Newman AFWNVVNWEKVDELYNATK
USA300_FPR3757 AFWNVVNWEKVDELYNATK
*******************