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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004122000
- symbol?: comGB
- synonym:
- description?: competence protein ComGB
- competence protein ComGB
- competence protein ComGB, putative
- competence protein ComGB-like protein
- putative competence protein ComGB
- type II secretion system F family protein
- Late competence protein ComGB, access of DNA to ComEA
- bacterial type II secretion system F domain protein
- ComG operon protein 2
- DNA transport machinery protein comGB
- DNA transport mechinery protein comGB
- Late competence protein, putative
- pseudogene
- putative type II secretion system protein
- type II secretion system protein
- type II secretion system protein F domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4393930..4394850
- synteny block?: BlockID0031520
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1501 (comGB)
08BA02176:
C248_1586
11819-97:
MS7_1560
6850:
RSAU_001408 (comGB)
71193:
ST398NM01_1608
ECT-R 2:
ECTR2_1394
ED133:
SAOV_1543
ED98:
SAAV_1535
HO 5096 0412:
SAEMRSA15_14630
JH1:
SaurJH1_1635
JH9:
SaurJH9_1601
JKD6008:
SAA6008_01513
JKD6159:
SAA6159_01478
LGA251:
SARLGA251_14490
M013:
M013TW_1558
MRSA252:
SAR1620
MSHR1132:
SAMSHR1132_13840
MSSA476:
SAS1481
Mu3:
SAHV_1530
Mu50:
SAV1543
MW2:
MW1495
RF122:
SAB1415c
ST398:
SAPIG1608
T0131:
SAT0131_01637
TCH60:
HMPREF0772_11598 (comGB)
TW20:
SATW20_15390
USA300_TCH1516:
USA300HOU_1545 (pulF)
VC40:
SAVC_06960
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLQCINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGT
N315 MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGT
NCTC8325 --------------------------------------------------MTYKNKQLGT
Newman MKLQCINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGT
USA300_FPR3757 MKLQCINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGT
**********
COL TILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLL
N315 TILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLL
NCTC8325 TILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLL
Newman TILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLL
USA300_FPR3757 TILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLL
************************************************************
COL KTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVM
N315 KTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVM
NCTC8325 KTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVM
Newman KTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVM
USA300_FPR3757 KTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVM
************************************************************
COL LIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
N315 LIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
NCTC8325 LIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
Newman LIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
USA300_FPR3757 LIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
************************************************************
COL SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLE
N315 SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLE
NCTC8325 SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLE
Newman SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLE
USA300_FPR3757 SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLE
************************************************************
COL VELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
N315 VELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
NCTC8325 VELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Newman VELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
USA300_FPR3757 VELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
********************************************************