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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004118000
- symbol?: comGF
- synonym:
- description?: competence protein ComGF
- competence protein ComGF
- competence protein ComGF, putative
- competence type IV pilus minor pilin ComGF
- competence ComGF-like protein
- Competence protein ComGF-like protein
- Late competence protein, putative
- Late competence protein ComGF, access of DNA to ComEA
- membrane associated protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4392432..4392808
- synteny block?: BlockID0031480
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1497 (comGF)
08BA02176:
C248_1582
11819-97:
MS7_1556 (comGF)
6850:
RSAU_001405 (comGF)
71193:
ST398NM01_1604
ECT-R 2:
ECTR2_1390
ED133:
SAOV_1539
ED98:
SAAV_1532
HO 5096 0412:
SAEMRSA15_14590
JH1:
SaurJH1_1631
JH9:
SaurJH9_1597
JKD6008:
SAA6008_01509 (comGF)
JKD6159:
SAA6159_01474 (comGF)
LGA251:
SARLGA251_14450
M013:
M013TW_1554
MRSA252:
SAR1616
MSHR1132:
SAMSHR1132_13800
MSSA476:
SAS1477
Mu3:
SAHV_1526
Mu50:
SAV1539
MW2:
MW1491
RF122:
SAB1411c
ST398:
SAPIG1604
T0131:
SAT0131_01633
TCH60:
HMPREF0772_11602 (comGF)
TW20:
SATW20_15350
USA300_TCH1516:
USA300HOU_1541
VC40:
SAVC_06940
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKT
N315 MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISIILLIVPDLIRLSKT
NCTC8325 MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKT
Newman MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKT
USA300_FPR3757 MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKT
********************************************** *************
COL FLIESRDLTTVDFEFFSRDILDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKV
N315 FLIESRELTTVDFEFFSRDILEDFKGVDKNDIEIRQQRIILHKGEEMIEYKLINNKIIKV
NCTC8325 FLIESRDLTTVDFEFFSRDILDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKV
Newman FLIESRDLTTVDFEFFSRDILDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKV
USA300_FPR3757 FLIESRDLTTVDFEFFSRDILDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKV
******:**************:******:*******:***********************
COL VNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQTKTIYV
N315 VNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNLQTKTIYV
NCTC8325 VNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQTKTIYV
Newman VNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQTKTIYV
USA300_FPR3757 VNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQTKTIYV
*************************************:*******