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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004113000
- symbol?: gcvPA
- synonym:
- description?: glycine dehydrogenase subunit 1
- glycine dehydrogenase subunit 1
- glycine dehydrogenase
- aminomethyl-transferring glycine dehydrogenase subunit GcvPA
- glycine cleavage system P protein, subunit 1
- aminotransferase class-V family protein
- glycine cleavage system P-family protein
- glycine dehydrogenase (decarboxylating)
- glycine dehydrogenase (glycine cleavage system P1 protein )
- glycine dehydrogenase, subunit 1 (glycine cleavage system P protein)
- Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein)
- glycine dehydrogenase [decarboxylating] subunit 1
- putative glycine cleavage system P-protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4389051..4390397
- synteny block?: BlockID0031430
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1494
08BA02176:
C248_1578
11819-97:
MS7_1553
6850:
RSAU_001402
71193:
ST398NM01_1601
ECT-R 2:
ECTR2_1387
ED133:
SAOV_1536
ED98:
SAAV_1528
HO 5096 0412:
SAEMRSA15_14560
JH1:
SaurJH1_1627
JH9:
SaurJH9_1594
JKD6008:
SAA6008_01505 (gcvPA)
JKD6159:
SAA6159_01471 (gcvPA)
LGA251:
SARLGA251_14420
M013:
M013TW_1551
MRSA252:
SAR1613
MSHR1132:
SAMSHR1132_13760
MSSA476:
SAS1474
Mu3:
SAHV_1523
Mu50:
SAV1536
MW2:
MW1488
RF122:
SAB1408c
ST398:
SAPIG1601
T0131:
SAT0131_01629
TCH60:
HMPREF0772_11605 (gcvP)
TW20:
SATW20_15320
USA300_TCH1516:
USA300HOU_1537 (gcvPA)
VC40:
SAVC_06925
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
N315 ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
NCTC8325 ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
Newman MCIVSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
USA300_FPR3757 ---MSHRYIPLTEKDKQEMLQTIGAKSIGELFGDVPSDILLNRDLNIAEGEAETTLLRRL
:********************************************************
COL NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
N315 NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
NCTC8325 NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
Newman NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
USA300_FPR3757 NRIASKNITKETHTSFLGAGVYDHYAPSVVDAMISRSEFYTAYTPYQPEISQGELQAIFE
************************************************************
COL FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
N315 FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
NCTC8325 FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
Newman FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
USA300_FPR3757 FQTLICELTDMDVANSSMYDGMTSFAEACILAFSQTKKNKIVVSKGLHYQALQVLHTYAK
************************************************************
COL TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLKKIHSFIEDKKAL
N315 TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIQSFIEDKKAL
NCTC8325 TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIHSFIEDKKAL
Newman TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIHSFIEDKKAL
USA300_FPR3757 TRKEFEVVEIDLDGTVTDLKKLEAAVDDETAAVAVQYPNFYGSIEDLEKIHSFIEDKKAL
***********************************************:**:*********
COL FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
N315 FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
NCTC8325 FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
Newman FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
USA300_FPR3757 FIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPAQFGGPHCGYFATTKKLMRKVPGRLV
************************************************************
COL GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
N315 GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
NCTC8325 GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
Newman GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
USA300_FPR3757 GQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAV
************************************************************
COL QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
N315 QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
NCTC8325 QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
Newman QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
USA300_FPR3757 QNIEHANYAKQQFIKKGFEVLDGTSFNEFVVKFDKPIQQVNEELVKYNIIGGFDLGVVSD
************************************************************
COL DFKNHMLIAVTELRTKDEIDTFVEKAGELND
N315 DFKNHMLIAVTELRTKDEIDTFVEKAGELND
NCTC8325 DFKNHMLIAVTELRTKDEIDTFVEKAGELND
Newman DFKNHMLIAVTELRTKDEIDTFVEKAGELND
USA300_FPR3757 DFKNHMLIAVTELRTKDEIDTFVEKAGELND
*******************************