⊟Summary[edit | edit source]

pan ID^?: SAUPAN004112000
symbol^?: gcvPB
synonym:
description^?: glycine dehydrogenase subunit 2
- glycine dehydrogenase subunit 2
- glycine dehydrogenase
- glycine cleavage system P protein, subunit 2
- aminotransferase class-V family protein
- glycine cleavage system P-family protein
- glycine dehydrogenase (decarboxylating)
- glycine dehydrogenase (glycine cleavage system P2 protein )
- Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein)
- glycine dehydrogenase [decarboxylating] subunit 2
- putative glycine cleavage system P-protein
strand^?: -
coordinates^?: 4387586..4389058
synteny block^?: BlockID0031420
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1593

N315:

SA1365

NCTC8325:

SAOUHSC_01632

Newman:

NWMN_1439 (gcvPB)

USA300_FPR3757:

SAUSA300_1496

04-02981:

SA2981_1493

08BA02176:

C248_1577

11819-97:

MS7_1552

6850:

RSAU_001401

71193:

ST398NM01_1600

ECT-R 2:

ECTR2_1386

ED133:

SAOV_1535

ED98:

SAAV_1527

HO 5096 0412:

SAEMRSA15_14550

JH1:

SaurJH1_1626

JH9:

SaurJH9_1593

JKD6008:

SAA6008_01504 (gcvPB)

JKD6159:

SAA6159_01470 (gcvPB)

LGA251:

SARLGA251_14410

M013:

M013TW_1550

MRSA252:

SAR1612

MSHR1132:

SAMSHR1132_13750

MSSA476:

SAS1473

Mu3:

SAHV_1522

Mu50:

SAV1535

MW2:

MW1487

RF122:

SAB1407c

ST398:

SAPIG1600

T0131:

SAT0131_01628

TCH60:

HMPREF0772_11606 (gcvP2)

TW20:

SATW20_15310

USA300_TCH1516:

USA300HOU_1536 (gcvPB)

VC40:

SAVC_06920

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKNKAEFPEVAELDLVRHY
N315            MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKNKAEFPEVAELDLVRHY
NCTC8325        MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKNKAEFPEVAELDLVRHY
Newman          MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKNKAEFPEVAELDLVRHY
USA300_FPR3757  MTSKSSPLIFERSREGRYAYSLPKSDIKTNSVESLLDDKFIRKNKAEFPEVAELDLVRHY
                ************************************************************

COL             TELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSL
N315            TELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSL
NCTC8325        TELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSL
Newman          TELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSL
USA300_FPR3757  TELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSL
                ************************************************************

COL             QEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASA
N315            QEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASA
NCTC8325        QEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASA
Newman          QEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASA
USA300_FPR3757  QEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASA
                ************************************************************

COL             SFAGFKSVTVKSNERGEVNIDDLKRVVNENTAAIMLTNPNTLGIFEKNIMEIREIVHNAG
N315            SFAGFKSVTVKSNERGEVDIDDLKRVVNENTAAIMLTNPNTLGIFEKNIMEIREIVHNAG
NCTC8325        SFAGFKSVTVKSNERGEVDIDDLKRVVNENTAAIMLTNPNTLGIFEKNIMEIREIVHNAG
Newman          SFAGFKSVTVKSNERGEVNIDDLKRVVNENTAAIMLTNPNTLGIFEKNIMEIREIVHNAG
USA300_FPR3757  SFAGFKSVTVKSNERGEVDIDDLKRVVNENTAAIMLTNPNTLGIFEKNIMEIREIVHNAG
                ******************:*****************************************

COL             GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVVKELASYLP
N315            GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVVKELASYLP
NCTC8325        GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVVKELASYLP
Newman          GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVVKELASYLP
USA300_FPR3757  GLLYYDGANLNAIMDKVRPGDMGFDAVHLNLHKTFTGPHGGGGPGSGPVGVVKELASYLP
                ************************************************************

COL             KPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIYLRAYTYIRTMGATGLKEVSEAAVLNA
N315            KPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIYLRAYTYIRTMGATGLKEVSEAAVLNA
NCTC8325        KPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIYLRAYTYIRTMGATGLKEVSEAAVLNA
Newman          KPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIYLRAYTYIRTMGATGLKEVSEAAVLNA
USA300_FPR3757  KPMVIKDGDKFKYDNDIKNSIGRVKPFYGNFGIYLRAYTYIRTMGATGLKEVSEAAVLNA
                ************************************************************

COL             NYIKARLSKHFEIPYKQYCKHEFVLSGVRQKEFGVRTLDMAKRLLDFGVHPPTIYFPLNV
N315            NYIKARLSEHFEIPYKQYCKHEFVLSGVRQKEFGVRTLDMAKRLLDFGVHPPTIYFPLNV
NCTC8325        NYIKARLSKHFEIPYKQYCKHEFVLSGVRQKEFGVRTLDMAKRLLDFGVHPPTIYFPLNV
Newman          NYIKARLSKHFEIPYKQYCKHEFVLSGVRQKEFGVRTLDMAKRLLDFGVHPPTIYFPLNV
USA300_FPR3757  NYIKARLSKHFEIPYKQYCKHEFVLSGVRQKEFGVRTLDMAKRLLDFGVHPPTIYFPLNV
                ********:***************************************************

COL             EEGMMIEPTETESKETLDYFIDTLISIAEEAKNDPDKVLEAPHTTVIDRLDEATAARKPI
N315            EEGMMIEPTETESKETLDYFIDTLISIAEEAKNDPDKVLEAPHTTVIDRLDEATAARKPI
NCTC8325        EEGMMIEPTETESKETLDYFIDTLISIAEEAKNDPDKVLEAPHTTVIDRLDEATAARKPI
Newman          EEGMMIEPTETESKETLDYFIDTLISIAEEAKNDPDKVLEAPHTTVIDRLDEATAARKPI
USA300_FPR3757  EEGMMIEPTETESKETLDYFIDTLISIAEEAKNDPDKVLEAPHTTVIDRLDEATAARKPI
                ************************************************************

COL             LKFENLKQEK
N315            LKFENLKQEK
NCTC8325        LKFENLKQEK
Newman          LKFENLKQEK
USA300_FPR3757  LKFENLKQEK
                **********

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]