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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004032000
- symbol?: nudF
- synonym:
- description?: NUDIX hydrolase
- NUDIX hydrolase
- MutT/nudix family protein
- ADP-ribose pyrophosphatase
- ADP-ribose pyrophosphatase, putative
- NUDIX domain-containing protein
- ADP-ribose diphosphatase
- adp-ribose pyrophosphatase (adp-ribose diphosphatase)(adenosine diphosphoribose pyrophosphatase) (adpr-ppase) (adp-ribosephosphohydrolase) (asppase)
- ADP-ribose pyrophosphatase, NudF
- putative ADP-ribose pyrophosphatase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4321457..4321999
- synteny block?: BlockID0030690
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1456
08BA02176:
C248_1539
11819-97:
MS7_1516 (nudF)
6850:
RSAU_001367
71193:
ST398NM01_1565
ECT-R 2:
ECTR2_1350
ED133:
SAOV_1501
ED98:
SAAV_1489
HO 5096 0412:
SAEMRSA15_14210
JH1:
SaurJH1_1587
JH9:
SaurJH9_1556
JKD6008:
SAA6008_01469 (nudF)
JKD6159:
SAA6159_01428 (nudF)
LGA251:
SARLGA251_14070
M013:
M013TW_1513
MRSA252:
SAR1575
MSHR1132:
SAMSHR1132_13380
MSSA476:
SAS1439
Mu3:
SAHV_1487
Mu50:
SAV1499
MW2:
MW1453
RF122:
SAB1360c
ST398:
SAPIG1565
T0131:
SAT0131_01592
TCH60:
HMPREF0772_11642
TW20:
SATW20_14970
USA300_TCH1516:
USA300HOU_1500 (nudF)
VC40:
SAVC_06745
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGAVAVCAVTPKKEVVLVK
N315 MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGAVAVCALTPKKEVVLVK
NCTC8325 MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGAVAVCAVTPKKEVVLVK
Newman MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGAVAVCAVTPKKEVVLVK
USA300_FPR3757 MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGAVAVCAVTPKKEVVLVK
*************************************************:**********
COL QYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKELTHVVDMYGSPGFCDEQL
N315 QYRKPVEKPLLEIPAGKLEDDENRVEAAKRELEEETGYIAKELTHVVDMYGSPGFCDEQL
NCTC8325 QYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKELTHVVDMYGSPGFCDEQL
Newman QYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKELTHVVDMYGSPGFCDEQL
USA300_FPR3757 QYRKPVEKPLLEIPAGKLEDDEDRVEAAKRELEEETGYIAKELTHVVDMYGSPGFCDEQL
**********************:*************************************
COL SIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEIEDAKTIIALQHLLLNYNHSK
N315 SIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEIEDAKTIIALQHLLLNYNHSK
NCTC8325 SIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEIEDAKTIIALQHLLLNYNHSK
Newman SIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEIEDAKTIIALQHLLLNYNHSK
USA300_FPR3757 SIYFTDNLEEGTVHLDEDEFVEVIKVPIENVKSMLMNKEIEDAKTIIALQHLLLNYNHSK
************************************************************