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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003925000
- symbol?: aroB
- synonym:
- description?: 3-dehydroquinate synthase
- 3-dehydroquinate synthase
- putative 3-dehydroquinate synthase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4246094..4247158
- synteny block?: BlockID0029710
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1421 (aroB)
08BA02176:
C248_1505 (aroB)
11819-97:
MS7_1421 (aroB)
6850:
RSAU_001337 (aroB)
71193:
ST398NM01_1465
ECT-R 2:
ECTR2_1319 (aroB)
ED133:
SAOV_1473 (aroB)
ED98:
SAAV_1452 (aroB)
HO 5096 0412:
SAEMRSA15_13260 (aroB)
JH1:
SaurJH1_1553 (aroB)
JH9:
SaurJH9_1524 (aroB)
JKD6008:
SAA6008_01434 (aroB)
JKD6159:
SAA6159_01330 (aroB)
LGA251:
SARLGA251_13790 (aroB)
M013:
M013TW_1413
MRSA252:
SAR1476 (aroB)
MSHR1132:
SAMSHR1132_13050
MSSA476:
SAS1408 (aroB)
Mu3:
SAHV_1453 (aroB)
Mu50:
SAV1465 (aroB)
MW2:
MW1355 (aroB)
RF122:
SAB1329c (aroB)
ST398:
SAPIG1465 (aroB)
T0131:
SAT0131_01554 (set2nm)
TCH60:
HMPREF0772_11739 (aroB)
TW20:
SATW20_14640 (aroB)
USA300_TCH1516:
USA300HOU_1403 (aroB)
VC40:
SAVC_06580 (aroB)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLQTTYPSNNYPIYVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVH
N315 MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVH
NCTC8325 MKLQTTYPSNNYPIYVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVH
Newman MKLQTTYPSNNYPIYVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVH
USA300_FPR3757 MKLQTTYPSNNYPIYVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVH
**************:*********************************************
COL KVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFIAATLLRGVHFI
N315 KVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFI
NCTC8325 KVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFIAATLLRGVHFI
Newman KVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFIAATLLRGVHFI
USA300_FPR3757 KVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFIAATLLRGVHFI
************************************************:***********
COL QVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVY
N315 QVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVY
NCTC8325 QVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLVFLKTLPFEQILSGYAEVY
Newman QVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVY
USA300_FPR3757 QVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVY
***************************************** ******************
COL KHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVIADEKEQGVRKFLNL
N315 KHALLNGESTTQEIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNL
NCTC8325 KHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVIADEKEQGVRKFLNL
Newman KHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVIADEKEQGVRKFLNL
USA300_FPR3757 KHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVIADEKEQGVRKFLNL
*********:**:********************************:**************
COL GHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFDSKHDINHYIQYLIQLGYPLDMITD
N315 GHTFGHAVEYNHKIAHGHAVMIGIIYQFIVANILFNSNHDIQHYINYLTKLGYPLETITD
NCTC8325 GHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFDSKHDINHYIQYLIQLGYPLDMITD
Newman GHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFDSKHDINHYIQYLIQLGYPLDMITD
USA300_FPR3757 GHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFDSKHDINHYIQYLIQLGYPLDMITD
********** ***.******:********** **:*:***:***:** :*****: ***
COL LDFETLYQYMLSDKKNDKQGVQMVLIRQFGDIVVQHVDQLTLQHACEQLKTYFK
N315 IDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK
NCTC8325 LDFETLYQYMLSDKKNDKQGVQMVLIRQFGDIVVQHVDQLTLQHACEQLKTYFK
Newman LDFETLYQYMLSDKKNDKQGVQMVLIRQFGDIVVQHVDQLTLQHACEQLKTYFK
USA300_FPR3757 LDFETLYQYMLSDKKNDKQGVQMVLIRQFGDIVVQHVDQLTLQHACEQLKTYFK
:****:********************::********:** **************