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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003859000
- symbol?: thyA
- synonym:
- description?: thymidylate synthase
- strand?: -
- coordinates?: 4140366..4141322
- synteny block?: BlockID0029150
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1381 (thyA)
08BA02176:
C248_1467 (thyA)
11819-97:
MS7_1383 (thyA)
6850:
RSAU_001306 (thyA)
71193:
ST398NM01_1428
ECT-R 2:
ECTR2_1283 (thyA)
ED133:
SAOV_1436c
ED98:
SAAV_1410 (thyA)
HO 5096 0412:
SAEMRSA15_12900 (thyA)
JH1:
SaurJH1_1516 (thyA)
JH9:
SaurJH9_1487 (thyA)
JKD6008:
SAA6008_01395 (thyA)
JKD6159:
SAA6159_01294 (thyA)
LGA251:
SARLGA251_13430 (thyA)
M013:
M013TW_1373
MRSA252:
SAR1440 (thyA)
MSHR1132:
SAMSHR1132_12690
MSSA476:
SAS1370 (thyA)
Mu3:
SAHV_1415 (thyA)
Mu50:
SAV1427 (thyA)
MW2:
MW1317 (thyA)
RF122:
SAB1282c (thyA)
ST398:
SAPIG1428 (thyA)
T0131:
SAT0131_01507 (guaA)
TCH60:
HMPREF0772_11779 (thyA)
TW20:
SATW20_14280 (thyA)
USA300_TCH1516:
USA300HOU_1364 (thyA)
VC40:
SAVC_06385 (thyA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
N315 MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
NCTC8325 MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
Newman MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
USA300_FPR3757 MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
************************************************************
COL ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
N315 ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQ
NCTC8325 ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
Newman ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
USA300_FPR3757 ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
***************************************:********************
COL YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
N315 YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
NCTC8325 YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
Newman YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
USA300_FPR3757 YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
************************************************************
COL RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
N315 RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
NCTC8325 RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
Newman RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
USA300_FPR3757 RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
************************************************************
COL HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
N315 HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
NCTC8325 HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
Newman HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
USA300_FPR3757 HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
************************************************************
COL LEIVDYESHPAIKAPIAV
N315 LEIVDYESHPAIKAPIAV
NCTC8325 LEIVDYESHPAIKAPIAV
Newman LEIVDYESHPAIKAPIAV
USA300_FPR3757 LEIVDYESHPAIKAPIAV
******************