Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003812000
- symbol?: alr2
- synonym:
- description?: alanine racemase
- alanine racemase
- alanine racemase 2
- Diaminopimelate epimerase
- alanine racemase, C-terminal domain protein
- alanine racemase family protein
- putative alanine racemase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4103092..4104177
- synteny block?: BlockID0028690
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1353
08BA02176:
C248_1438 (dal)
11819-97:
MS7_1355
6850:
RSAU_001278 (alr)
71193:
ST398NM01_1400
ECT-R 2:
ECTR2_1256
ED133:
SAOV_1408 (alr)
ED98:
SAAV_1382
HO 5096 0412:
SAEMRSA15_12620 (dal)
JH1:
SaurJH1_1489
JH9:
SaurJH9_1460
JKD6008:
SAA6008_01363 (alr2)
JKD6159:
SAA6159_01265 (alr2)
LGA251:
SARLGA251_13150 (dal)
M013:
M013TW_1343
MRSA252:
SAR1411 (dal)
MSHR1132:
SAMSHR1132_12400
MSSA476:
SAS1340
Mu3:
SAHV_1387
Mu50:
SAV1399
MW2:
MW1287
RF122:
SAB1254 (alr)
ST398:
SAPIG1400
T0131:
SAT0131_01474 (bcr)
TCH60:
HMPREF0772_11810 (dal)
TW20:
SATW20_13980 (dal)
USA300_TCH1516:
USA300HOU_1334 (alr1)
VC40:
SAVC_06240
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
N315 MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
NCTC8325 MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
Newman MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
USA300_FPR3757 MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
************************************************************
COL AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
N315 AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
NCTC8325 AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
Newman AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
USA300_FPR3757 AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
************************************************************
COL HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
N315 HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
NCTC8325 HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
Newman HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
USA300_FPR3757 HRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
************************************************************
COL LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTLKA
N315 LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
NCTC8325 LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTLKA
Newman LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTLKA
USA300_FPR3757 LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTLKA
*********************************************************:**
COL HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
N315 HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
NCTC8325 HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
Newman HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
USA300_FPR3757 HVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
************************************************************
COL LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
N315 LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
NCTC8325 LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
Newman LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
USA300_FPR3757 LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
************************************************************
COL C
N315 C
NCTC8325 C
Newman C
USA300_FPR3757 C
*