PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003810000
• symbol^?: dapD
• synonym:
• description^?: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase

  descriptions from strain specific annotations:

  • 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
  • tetrahydrodipicolinate acetyltransferase
  • 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
  • putative tetrahydrodipicolinateacetyltransferase
  • tetrahydrodipicolinate N-acetyltransferase
  • 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
  • 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
  • tetrahydrodipicolinate succinyltransferase domain-containing protein
  • transferase hexapeptide (three repeats) family protein
• strand^?: +
• coordinates^?: 4101074..4101793
• synteny block^?: BlockID0028670
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1432 (dapD)
N315:
SA1229 (dapD)
NCTC8325:
SAOUHSC_01398
Newman:
NWMN_1308 (dapD)
USA300_FPR3757:
SAUSA300_1290 (dapD)
04-02981:
SA2981_1351 (dapD)
08BA02176:
C248_1436 (dapD)
11819-97:
MS7_1353 (dapD)
6850:
RSAU_001276 (dapD)
71193:
ST398NM01_1398
ECT-R 2:
ECTR2_1254
ED133:
SAOV_1406 (dapD)
ED98:
SAAV_1380 (dapD)
HO 5096 0412:
SAEMRSA15_12600 (dapD)
JH1:
SaurJH1_1487
JH9:
SaurJH9_1458
JKD6008:
SAA6008_01361 (dapD)
JKD6159:
SAA6159_01263 (dapD)
LGA251:
SARLGA251_13130 (dapD)
M013:
M013TW_1341
MRSA252:
SAR1409 (dapD)
MSHR1132:
SAMSHR1132_12380
MSSA476:
SAS1338
Mu3:
SAHV_1385 (dapD)
Mu50:
SAV1397 (dapD)
MW2:
MW1285 (dapD)
RF122:
SAB1252 (dapD)
ST398:
SAPIG1398
T0131:
SAT0131_01472
TCH60:
HMPREF0772_11812 (dapD)
TW20:
SATW20_13960 (dapD)
USA300_TCH1516:
USA300HOU_1332 (dapD)
VC40:
SAVC_06230

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKP
  N315            MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKP
  NCTC8325        MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKP
  Newman          MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKP
  USA300_FPR3757  MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKP
                  ************************************************************
  
  COL             FYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATIN
  N315            FYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATIN
  NCTC8325        FYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATIN
  Newman          FYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATIN
  USA300_FPR3757  FYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATIN
                  ************************************************************
  
  COL             IGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAV
  N315            IGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAV
  NCTC8325        IGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAV
  Newman          IGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAV
  USA300_FPR3757  IGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAV
                  ************************************************************
  
  COL             ILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND
  N315            ILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND
  NCTC8325        ILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND
  Newman          ILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPCKVIKAASEVQDTKKEIVAALRKLND
  USA300_FPR3757  ILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND
                  *********************************.**** ********************