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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003809000
- symbol?: dapB
- synonym:
- description?: 4-hydroxy-tetrahydrodipicolinate reductase
- 4-hydroxy-tetrahydrodipicolinate reductase
- dihydrodipicolinate reductase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4100325..4101047
- synteny block?: BlockID0028660
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1350 (dapB)
08BA02176:
C248_1435 (dapB)
11819-97:
MS7_1352 (dapB)
6850:
RSAU_001275 (dapB)
71193:
ST398NM01_1397
ECT-R 2:
ECTR2_1253 (dapB)
ED133:
SAOV_1405 (dapB)
ED98:
SAAV_1379 (dapB)
HO 5096 0412:
SAEMRSA15_12590 (dapB)
JH1:
SaurJH1_1486
JH9:
SaurJH9_1457
JKD6008:
SAA6008_01360 (dapB)
JKD6159:
SAA6159_01262 (dapB)
LGA251:
SARLGA251_13120 (dapB)
M013:
M013TW_1340
MRSA252:
SAR1408 (dapB)
MSHR1132:
SAMSHR1132_12370
MSSA476:
SAS1337
Mu3:
SAHV_1384 (dapB)
Mu50:
SAV1396 (dapB)
MW2:
MW1284 (dapB)
RF122:
SAB1251 (dapB)
ST398:
SAPIG1397 (dapB)
T0131:
SAT0131_01470
TCH60:
HMPREF0772_11813 (dapB)
TW20:
SATW20_13950 (dapB)
USA300_TCH1516:
USA300HOU_1331 (dapB)
VC40:
SAVC_06225
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSN
N315 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKDADVAIDFSN
NCTC8325 ----------MNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSN
Newman MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSN
USA300_FPR3757 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSN
****************************************.*********
COL PNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAA
N315 PNLLFPLLDEEFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAA
NCTC8325 PNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAA
Newman PNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAA
USA300_FPR3757 PNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAA
**********:*************************************************
COL VPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIG
N315 VPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIG
NCTC8325 VPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIG
Newman VPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIG
USA300_FPR3757 VPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIG
************************************************************
COL IHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
N315 IHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
NCTC8325 IHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
Newman IHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
USA300_FPR3757 IHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
************************************************************