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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003808000
- symbol?: dapA
- synonym:
- description?: 4-hydroxy-tetrahydrodipicolinate synthase
- 4-hydroxy-tetrahydrodipicolinate synthase
- dihydrodipicolinate synthase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4099441..4100328
- synteny block?: BlockID0028650
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1349 (dapA)
08BA02176:
C248_1434 (dapA)
11819-97:
MS7_1351 (dapA)
6850:
RSAU_001274 (dapA)
71193:
ST398NM01_1396
ECT-R 2:
ECTR2_1252 (dapA)
ED133:
SAOV_1404 (dapA)
ED98:
SAAV_1378 (dapA)
HO 5096 0412:
SAEMRSA15_12580 (dapA)
JH1:
SaurJH1_1485
JH9:
SaurJH9_1456
JKD6008:
SAA6008_01359 (dapA)
JKD6159:
SAA6159_01261 (dapA)
LGA251:
SARLGA251_13110 (dapA)
M013:
M013TW_1339
MRSA252:
SAR1407 (dapA)
MSHR1132:
SAMSHR1132_12360
MSSA476:
SAS1336 (dapA)
Mu3:
SAHV_1383 (dapA)
Mu50:
SAV1395 (dapA)
MW2:
MW1283 (dapA)
RF122:
SAB1250 (dapA)
ST398:
SAPIG1396 (dapA)
T0131:
SAT0131_01469
TCH60:
HMPREF0772_11814 (dapA)
TW20:
SATW20_13940 (dapA)
USA300_TCH1516:
USA300HOU_1330 (dapA)
VC40:
SAVC_06220
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTHLFEGVGVALTTPFTNNKVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKER
N315 MTHLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKER
NCTC8325 MTHLFEGVGVALTTPFTNNKVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKER
Newman MTHLFEGVGVALTTPFTNNKVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKER
USA300_FPR3757 MTHLFEGVGVALTTPFTNNKVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKER
**********************:****:********************************
COL ILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKH
N315 ILKTVIDLVDKRVPVIAGTGTNDTEKSIQASFQAKALGADAIMLITPYYNKTNQRGLVKH
NCTC8325 ILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKH
Newman ILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKH
USA300_FPR3757 ILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKH
*******************************:****************************
COL FEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRID
N315 FEAITDAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRID
NCTC8325 FEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRID
Newman FEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRID
USA300_FPR3757 FEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRID
****:*******************************************************
COL TNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTL
N315 TNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTL
NCTC8325 TNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTL
Newman TNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTL
USA300_FPR3757 TNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTL
************************************************************
COL LSALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLRETYDTFKAGENE
N315 LSALSVDINPIPIKALTSYLEFGNYELRLPLVSLEDTDTKVLREAYDTFKAGENE
NCTC8325 LSALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLRETYDTFKAGENE
Newman LSALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLRETYDTFKAGENE
USA300_FPR3757 LSALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLRETYDTFKAGENE
******************** ***********************:**********