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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003806000
- symbol?: lysC
- synonym:
- description?: aspartate kinase
- aspartate kinase
- Aspartokinase
- aspartate kinase domain protein
- aspartate kinase II
- aspartokinase, alpha and beta subunits
- aspartokinase 2 (Aspartokinase II) (Aspartate kinase 2)
- aspartokinase II
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4097180..4098385
- synteny block?: BlockID0028630
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1347 (lysC)
08BA02176:
C248_1432 (lysC)
11819-97:
MS7_1349
6850:
RSAU_001272 (lysC)
71193:
ST398NM01_1394
ECT-R 2:
ECTR2_1250
ED133:
SAOV_1402 (lysC)
ED98:
SAAV_1376 (lysC)
HO 5096 0412:
SAEMRSA15_12560 (lysC)
JH1:
SaurJH1_1483
JH9:
SaurJH9_1454
JKD6008:
SAA6008_01357 (lysC)
JKD6159:
SAA6159_01259 (lysC)
LGA251:
SARLGA251_13090 (lysC)
M013:
M013TW_1337
MRSA252:
SAR1405 (lysC)
MSHR1132:
SAMSHR1132_12340
MSSA476:
SAS1334
Mu3:
SAHV_1381 (lysC)
Mu50:
SAV1393 (lysC)
MW2:
MW1281 (lysC)
RF122:
SAB1248 (lysC)
ST398:
SAPIG1394
T0131:
SAT0131_01467 (bioD)
TCH60:
HMPREF0772_11816 (lysC)
TW20:
SATW20_13920 (lysC)
USA300_TCH1516:
USA300HOU_1328 (lysC2)
VC40:
SAVC_06210
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
N315 MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
NCTC8325 MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
Newman MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
USA300_FPR3757 MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
*******************:****************************************
COL APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
N315 APKQQELALLLTTGEQQTVSYLSMVLNDIGVNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
NCTC8325 APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
Newman APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
USA300_FPR3757 APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
******************************:*****************************
COL TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
N315 TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
NCTC8325 TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
Newman TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
USA300_FPR3757 TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
************************************************************
COL TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
N315 TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
NCTC8325 TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
Newman TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
USA300_FPR3757 TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
************************************************************
COL MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
N315 MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
NCTC8325 MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
Newman MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
USA300_FPR3757 ISNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
:***********************************************************
COL GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
N315 GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
NCTC8325 GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
Newman GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
USA300_FPR3757 GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
************************************************************
COL TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
N315 TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
NCTC8325 TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
Newman TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
USA300_FPR3757 TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
*****************************************