PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003806000
• symbol^?: lysC
• synonym:
• description^?: aspartate kinase

  descriptions from strain specific annotations:

  • aspartate kinase
  • Aspartokinase
  • aspartate kinase domain protein
  • aspartate kinase II
  • aspartokinase, alpha and beta subunits
  • aspartokinase 2 (Aspartokinase II) (Aspartate kinase 2)
  • aspartokinase II
• strand^?: +
• coordinates^?: 4097180..4098385
• synteny block^?: BlockID0028630
• occurrence^?: in 100% of 34 strains

⊟Orthologs

COL:
SACOL1428 (lysC)
N315:
SA1225 (lysC)
NCTC8325:
SAOUHSC_01394
Newman:
NWMN_1304 (lysC)
USA300_FPR3757:
SAUSA300_1286
JSNZ:
JSNZ_001377
04-02981:
SA2981_1347 (lysC)
08BA02176:
C248_1432 (lysC)
11819-97:
MS7_1349
6850:
RSAU_001272 (lysC)
71193:
ST398NM01_1394
ECT-R 2:
ECTR2_1250
ED133:
SAOV_1402 (lysC)
ED98:
SAAV_1376 (lysC)
HO 5096 0412:
SAEMRSA15_12560 (lysC)
JH1:
SaurJH1_1483
JH9:
SaurJH9_1454
JKD6008:
SAA6008_01357 (lysC)
JKD6159:
SAA6159_01259 (lysC)
LGA251:
SARLGA251_13090 (lysC)
M013:
M013TW_1337
MRSA252:
SAR1405 (lysC)
MSHR1132:
SAMSHR1132_12340
MSSA476:
SAS1334
Mu3:
SAHV_1381 (lysC)
Mu50:
SAV1393 (lysC)
MW2:
MW1281 (lysC)
RF122:
SAB1248 (lysC)
ST398:
SAPIG1394
T0131:
SAT0131_01467 (bioD)
TCH60:
HMPREF0772_11816 (lysC)
TW20:
SATW20_13920 (lysC)
USA300_TCH1516:
USA300HOU_1328 (lysC2)
VC40:
SAVC_06210

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
  N315            MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
  NCTC8325        MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
  Newman          MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
  USA300_FPR3757  MVTRSVLKFGGSSVSDFTKIKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK
                  *******************:****************************************
  
  COL             APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
  N315            APKQQELALLLTTGEQQTVSYLSMVLNDIGVNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
  NCTC8325        APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
  Newman          APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
  USA300_FPR3757  APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ
                  ******************************:*****************************
  
  COL             TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
  N315            TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
  NCTC8325        TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
  Newman          TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
  USA300_FPR3757  TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA
                  ************************************************************
  
  COL             TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
  N315            TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
  NCTC8325        TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
  Newman          TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
  USA300_FPR3757  TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI
                  ************************************************************
  
  COL             MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
  N315            MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
  NCTC8325        MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
  Newman          MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
  USA300_FPR3757  ISNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD
                  :***********************************************************
  
  COL             GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
  N315            GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
  NCTC8325        GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
  Newman          GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
  USA300_FPR3757  GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL
                  ************************************************************
  
  COL             TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
  N315            TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
  NCTC8325        TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
  Newman          TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
  USA300_FPR3757  TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI
                  *****************************************