PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003626000
• symbol^?: glnA
• synonym:
• description^?: glutamine synthetase

  descriptions from strain specific annotations:

  • glutamine synthetase
  • glutamine synthetase, type I
  • glutamine-ammonia ligase
  • type I glutamate--ammonia ligase
  • glutamate--ammonia ligase
  • glutamine synthetase FemC
  • Glutamine synthetase type I
• strand^?: +
• coordinates^?: 3963513..3964868
• synteny block^?: BlockID0026960
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1329 (femC)
N315:
SA1150 (glnA)
NCTC8325:
SAOUHSC_01287
Newman:
NWMN_1217 (glnA)
USA300_FPR3757:
SAUSA300_1201 (glnA)
04-02981:
SA2981_1266 (glnA)
08BA02176:
C248_1343 (glnA)
11819-97:
MS7_1266 (glnA)
6850:
RSAU_001192 (glnA)
71193:
ST398NM01_1311
ECT-R 2:
ECTR2_1166 (glnA)
ED133:
SAOV_1310 (glnA)
ED98:
SAAV_1283 (femC)
HO 5096 0412:
SAEMRSA15_11430 (glnA)
JH1:
SaurJH1_1394
JH9:
SaurJH9_1368
JKD6008:
SAA6008_01263 (glnA)
JKD6159:
SAA6159_01163 (glnA)
LGA251:
SARLGA251_12190 (glnA)
M013:
M013TW_1250
MRSA252:
SAR1284 (glnA)
MSHR1132:
SAMSHR1132_11510
MSSA476:
SAS1242
Mu3:
SAHV_1299 (glnA)
Mu50:
SAV1310 (glnA)
MW2:
MW1192 (glnA)
RF122:
SAB1172 (glnA)
ST398:
SAPIG1311 (glnA)
T0131:
SAT0131_01366
TCH60:
HMPREF0772_11917 (glnA)
TW20:
SATW20_13020 (glnA)
USA300_TCH1516:
USA300HOU_1240 (glnA)
VC40:
SAVC_05740

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             -----MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
  N315            -----MPKRTFTKEDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
  NCTC8325        -----MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
  Newman          MEDFKMPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
  USA300_FPR3757  -----MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
                       ********:**********************************************
  
  COL             GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
  N315            GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
  NCTC8325        GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
  Newman          GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
  USA300_FPR3757  GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
                  ************************************************************
  
  COL             RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
  N315            RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
  NCTC8325        RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
  Newman          RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
  USA300_FPR3757  RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
                  ************************************************************
  
  COL             LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
  N315            LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
  NCTC8325        LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
  Newman          LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
  USA300_FPR3757  LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
                  ************************************************************
  
  COL             KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
  N315            KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
  NCTC8325        KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
  Newman          KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
  USA300_FPR3757  KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
                  ************************************************************
  
  COL             NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
  N315            NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
  NCTC8325        NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
  Newman          NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
  USA300_FPR3757  NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
                  ************************************************************
  
  COL             GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
  N315            GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
  NCTC8325        GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
  Newman          GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
  USA300_FPR3757  GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
                  ************************************************************
  
  COL             YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
  N315            YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
  NCTC8325        YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
  Newman          YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
  USA300_FPR3757  YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
                  *******************************