Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003625000
- symbol?: glnR
- synonym:
- description?: MerR family transcriptional regulator
- MerR family transcriptional regulator
- glutamine synthetase repressor
- glutamine synthetase
- FemC, factor involved in methicillin resistance / Glutamine synthetase repressor
- HTH-type transcriptional regulator glnR
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3963141..3963509
- synteny block?: BlockID0026950
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1265 (femC)
08BA02176:
C248_1342 (glnR)
11819-97:
MS7_1265 (glnR)
6850:
RSAU_001191 (glnR)
71193:
ST398NM01_1310
ECT-R 2:
ECTR2_1165
ED133:
SAOV_1309 (glnR)
ED98:
SAAV_1282 (glnR)
HO 5096 0412:
SAEMRSA15_11420 (glnR)
JH1:
SaurJH1_1393
JH9:
SaurJH9_1367
JKD6008:
SAA6008_01262 (glnR)
JKD6159:
SAA6159_01162 (glnR)
LGA251:
SARLGA251_12180 (glnR)
M013:
M013TW_1249
MRSA252:
SAR1283 (glnR)
MSHR1132:
SAMSHR1132_11500
MSSA476:
SAS1241
Mu3:
SAHV_1298 (glnR)
Mu50:
SAV1309 (glnR)
MW2:
MW1191 (glnR)
RF122:
SAB1171 (glnR)
ST398:
SAPIG1310
T0131:
SAT0131_01364
TCH60:
HMPREF0772_11918 (glnR)
TW20:
SATW20_13010 (glnR)
USA300_TCH1516:
USA300HOU_1239 (glnR)
VC40:
SAVC_05735
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
N315 MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
NCTC8325 MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
Newman MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
USA300_FPR3757 MISNDAIRRNMAVFSMSVVSKLTDLTPRQIRYYETHELIKPERTEGQKRLFSLNDLERLL
************************************************************
COL EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
N315 EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
NCTC8325 EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
Newman EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
USA300_FPR3757 EIKSLLEKGFNIKGIKQIIYDSQEHLTTDEQEIRKKMIVDATQKPIGETLPINRGDLSRF
************************************************************
COL IK
N315 IK
NCTC8325 IK
Newman IK
USA300_FPR3757 IK
**