⊟Summary[edit | edit source]

pan ID^?: SAUPAN003596000
symbol^?: miaB
synonym:
description^?: (dimethylallyl)adenosine tRNA methylthiotransferase
- (dimethylallyl)adenosine tRNA methylthiotransferase
- tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
- tRNA-i(6)A37 thiotransferase enzyme MiaB
- (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
- radical SAM superfamily protein
- tRNA 2-methylthioadenosine synthase
- tRNA-i(6)A37 methylthiotransferase
- tRNA-i(6)A37 modification enzyme MiaB
strand^?: +
coordinates^?: 3938142..3939686
synteny block^?: BlockID0026730
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1312 (miaB)

N315:

SA1134

NCTC8325:

SAOUHSC_01269

Newman:

NWMN_1201 (miaB)

USA300_FPR3757:

SAUSA300_1185 (miaB)

04-02981:

SA2981_1250

08BA02176:

C248_1326

11819-97:

MS7_1250 (miaB)

6850:

RSAU_001175 (miaB)

71193:

ST398NM01_1295

ECT-R 2:

ECTR2_1148 (miaB)

ED133:

SAOV_1294

ED98:

SAAV_1267 (miaB)

HO 5096 0412:

SAEMRSA15_11270

JH1:

SaurJH1_1378

JH9:

SaurJH9_1352

JKD6008:

SAA6008_01247 (miaB)

JKD6159:

SAA6159_01147 (miaB)

LGA251:

SARLGA251_12030

M013:

M013TW_1234

MRSA252:

SAR1268

MSHR1132:

SAMSHR1132_11350

MSSA476:

SAS1226

Mu3:

SAHV_1282

Mu50:

SAV1292

MW2:

MW1175

RF122:

SAB1154

ST398:

SAPIG1295 (miaB)

T0131:

SAT0131_01348

TCH60:

HMPREF0772_11936 (miaB2)

TW20:

SATW20_12860

USA300_TCH1516:

USA300HOU_1224 (miaB)

VC40:

SAVC_05625

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKRGKQEVRYNRDFQIDEK
N315            MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKRGKQEVRYNRDFQIDEK
NCTC8325        MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKRGKQEVRYNRDFQIDEK
Newman          MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKRGKQEVRYNRDFQIDEK
USA300_FPR3757  MNEEQRKASSVDVLAERDKKAEKDYSKYFEHVYQPPNLKEAKKRGKQEVRYNRDFQIDEK
                ************************************************************

COL             YRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDINTADVILINTCAIRENAE
N315            YRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDINTADVILINTCAIRENAE
NCTC8325        YRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDINTADVILINTCAIRENAE
Newman          YRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDINTADVILINTCAIRENAE
USA300_FPR3757  YRGMGNERTFLIKTYGCQMNAHDTEVIAGILEALGYQATTDINTADVILINTCAIRENAE
                ************************************************************

COL             NKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEI
N315            NKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEI
NCTC8325        NKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEI
Newman          NKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEI
USA300_FPR3757  NKVFSEIGNLKHLKKERPDILIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEI
                ************************************************************

COL             LEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVNIMYGCDKFCTYCIVPFTRGKER
N315            LEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVNIMYGCDKFCTYCIVPFTRGKER
NCTC8325        LEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVNIMYGCDKFCTYCIVPFTRGKER
Newman          LEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVNIMYGCDKFCTYCIVPFTRGKER
USA300_FPR3757  LEEAYLSKAMVVEVWSKEGDVIENLPKVREGNIKAWVNIMYGCDKFCTYCIVPFTRGKER
                ************************************************************

COL             SRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYDLGDLLQAISKIAIPRVRF
N315            SRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYDLGDLLQAISKIAIPRVRF
NCTC8325        SRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYDLGDLLQAISKIAIPRVRF
Newman          SRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYDLGDLLQAISKIAIPRVRF
USA300_FPR3757  SRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYDLGDLLQAISKIAIPRVRF
                ************************************************************

COL             TTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVKRIKDR
N315            TTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVKRIKDR
NCTC8325        TTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVKRIKDR
Newman          TTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVKRIKDR
USA300_FPR3757  TTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVKRIKDR
                ************************************************************

COL             IPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFEHAYTYLYSQRDGTPAAKMKDNVPLN
N315            IPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFEHAYTYLYSQRDGTPAAKMKDNVPLN
NCTC8325        IPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFEHAYTYLYSQRDGTPAAKMKDNVPLN
Newman          IPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFEHAYTYLYSQRDGTPAAKMKDNVPLN
USA300_FPR3757  IPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFEHAYTYLYSQRDGTPAAKMKDNVPLN
                ************************************************************

COL             VKKERLQRLNKKVGHYSQIAMSKYEGQTVTVLCEGSSKKDDQVLAGYTDKNKLVNFKAPK
N315            VKKERLQRLNKKVGHYSQIAMSKYEGQTVTVLCEGSSKKDDQVLAGYTDKNKLVNFKAPK
NCTC8325        VKKERLQRLNKKVGHYSQIAMSKYEGQTVTVLCEGSSKKDDQVLAGYTDKNKLVNFKAPK
Newman          VKKERLQRLNKKVGHYSQIAMSKYEGQTVTVLCEGSSKKDDQVLAGYTDKNKLVNFKAPK
USA300_FPR3757  VKKERLQRLNKKVGHYSQIAMSKYEGQTVTVLCEGSSKKDDQVLAGYTDKNKLVNFKAPK
                ************************************************************

COL             EMIGKLVEVRIDEAKQYSLNGSFIKEVEPEMVIQ
N315            EMIGKLVEVRIDEAKQYSLNGSFVKEVEPEMVIQ
NCTC8325        EMIGKLVEVRIDEAKQYSLNGSFIKEVEPEMVIQ
Newman          EMIGKLVEVRIDEAKQYSLNGSFIKEVEPEMVIQ
USA300_FPR3757  EMIGKLVEVRIDEAKQYSLNGSFIKEVEPEMVIQ
                ***********************:**********

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]