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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003574000
- symbol?: rpsO
- synonym:
- description?: 30S ribosomal protein S15
- strand?: +
- coordinates?: 3911751..3912026
- synteny block?: BlockID0026510
- occurrence?: in 100% of 34 strains
rpsO : 30S ribosomal protein S15 [1]
• Two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S13 is also known as "uS13" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1231 (rpsO)
08BA02176:
C248_1306 (rpsO)
11819-97:
MS7_1231 (rpsO)
6850:
RSAU_001156 (rpsO)
71193:
ST398NM01_1275
ECT-R 2:
ECTR2_1129 (rpsO)
ED133:
SAOV_1275 (rpsO)
ED98:
SAAV_1248 (rpsO)
HO 5096 0412:
SAEMRSA15_11060 (rpsO)
JH1:
SaurJH1_1359 (rpsO)
JH9:
SaurJH9_1333 (rpsO)
JKD6008:
SAA6008_01228 (rpsO)
JKD6159:
SAA6159_01128 (rpsO)
JSNZ:
JSNZ_001245 (rpsO)
LGA251:
SARLGA251_11840 (rpsO)
M013:
M013TW_1213
MRSA252:
SAR1249 (rpsO)
MSHR1132:
SAMSHR1132_11160
MSSA476:
SAS1207 (rpsO)
Mu3:
SAHV_1263 (rpsO)
Mu50:
SAV1273 (rpsO)
MW2:
MW1156 (rpsO)
RF122:
SAB1135 (rpsO)
ST398:
SAPIG1275 (rpsO)
T0131:
SAT0131_01327 (hutI)
TCH60:
HMPREF0772_11956 (rpsO)
TW20:
SATW20_12670 (rpsO)
USA300_TCH1516:
USA300HOU_1205 (rpsO)
VC40:
SAVC_05530 (rpsO)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMV
N315 MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMV
NCTC8325 MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMV
Newman MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMV
USA300_FPR3757 MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMV
************************************************************
COL GRRRHLLNYLRSKDIQRYRELIKSLGIRR
N315 GRRRHLLNYLRSKDIQRYRELIKSLGIRR
NCTC8325 GRRRHLLNYLRSKDIQRYRELIKSLGIRR
Newman GRRRHLLNYLRSKDIQRYRELIKSLGIRR
USA300_FPR3757 GRRRHLLNYLRSKDIQRYRELIKSLGIRR
*****************************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)