PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003569000
• symbol^?: rplGA
• synonym:
• description^?: ribosomal protein L7Ae

  descriptions from strain specific annotations:

  • ribosomal protein L7Ae
  • 50S ribosomal protein L7
  • L7Ae/L30e/S12e/Gadd45 family ribosomal protein
  • YlxQ family RNA-binding protein
  • 30S ribosomal protein L7 AE
  • ribosomal protein L7AE family protein
  • 50S ribosomal protein L7/L12
  • 50S ribosomal protein L7AE
  • putative ribosomal protein
  • ribosomal family protein, L7Ae/L30e/S12e/Gadd45
  • ribosomal protein L7/L12
  • ribosomal protein L7Ae/L30e/S12e/Gadd45
  • ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
• strand^?: +
• coordinates^?: 3906310..3906627
• synteny block^?: BlockID0026460
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1287
N315:
SA1111
NCTC8325:
SAOUHSC_01245
Newman:
NWMN_1177 (rpl7AE)
USA300_FPR3757:
SAUSA300_1161
04-02981:
SA2981_1226
08BA02176:
C248_1301
11819-97:
MS7_1226
6850:
RSAU_001151
71193:
ST398NM01_1270
ECT-R 2:
ECTR2_1124
ED133:
SAOV_1270
ED98:
SAAV_1243
HO 5096 0412:
SAEMRSA15_11010
JH1:
SaurJH1_1354
JH9:
SaurJH9_1328
JKD6008:
SAA6008_01223 (rpl7AE)
JKD6159:
SAA6159_01123 (rpl7AE)
LGA251:
SARLGA251_11790
M013:
M013TW_1208
MRSA252:
SAR1244
MSHR1132:
SAMSHR1132_11110
MSSA476:
SAS1202
Mu3:
SAHV_1258
Mu50:
SAV1268
MW2:
MW1151
RF122:
SAB1130
ST398:
SAPIG1270
T0131:
SAT0131_01321
TCH60:
HMPREF0772_11961 (rplL2)
TW20:
SATW20_12620
USA300_TCH1516:
USA300HOU_1200 (rplL2)
VC40:
SAVC_05505

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYK
  N315            MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYK
  NCTC8325        MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYK
  Newman          MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYK
  USA300_FPR3757  MSIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYK
                  ************************************************************
  
  COL             VPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEYHKE
  N315            VPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEYHKE
  NCTC8325        VPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEYHKE
  Newman          VPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEYHKE
  USA300_FPR3757  VPFRKFGNRNELGIALGKGERVNVGITDPGFAKKLLSMIDEYHKE
                  *********************************************