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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003559000
- symbol?: frr
- synonym:
- description?: ribosome recycling factor
- ribosome recycling factor
- ribosome Recycling Factor (RRF)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3893698..3894252
- synteny block?: BlockID0026360
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1217 (frr)
08BA02176:
C248_1292 (frr)
11819-97:
MS7_1217 (frr)
6850:
RSAU_001141 (rrf)
71193:
ST398NM01_1261
ECT-R 2:
ECTR2_1115 (frr)
ED133:
SAOV_1261
ED98:
SAAV_1234 (frr)
HO 5096 0412:
SAEMRSA15_10920 (frr)
JH1:
SaurJH1_1345 (frr)
JH9:
SaurJH9_1319 (frr)
JKD6008:
SAA6008_01214 (frr)
JKD6159:
SAA6159_01114 (frr)
LGA251:
SARLGA251_11700 (frr)
M013:
M013TW_1199
MRSA252:
SAR1235 (frr)
MSHR1132:
SAMSHR1132_11020
MSSA476:
SAS1193 (frr)
Mu3:
SAHV_1249 (frr)
Mu50:
SAV1259 (frr)
MW2:
MW1142 (frr)
RF122:
SAB1121 (frr)
ST398:
SAPIG1261 (frr)
T0131:
SAT0131_01312
TCH60:
HMPREF0772_11971 (frr)
TW20:
SATW20_12530 (frr)
USA300_TCH1516:
—
VC40:
SAVC_05460 (frr)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
N315 MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
NCTC8325 MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
Newman MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
USA300_FPR3757 MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPE
************************************************************
COL ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
N315 ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
NCTC8325 ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
Newman ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
USA300_FPR3757 ARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIG
************************************************************
COL EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
N315 EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
NCTC8325 EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
Newman EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
USA300_FPR3757 EEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKD
************************************************************
COL IMSV
N315 IMSV
NCTC8325 IMSV
Newman IMSV
USA300_FPR3757 IMSV
****