PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003558000
• symbol^?: pyrH
• synonym:
• description^?: uridylate kinase

  descriptions from strain specific annotations:

  • uridylate kinase
  • UMP kinase
  • putative uridylate kinase
• strand^?: +
• coordinates^?: 3892903..3893679
• synteny block^?: BlockID0026350
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1277 (pyrH)
N315:
SA1101 (pyrH)
NCTC8325:
SAOUHSC_01235 (pyrH)
Newman:
NWMN_1168 (pyrH)
USA300_FPR3757:
SAUSA300_1151 (pyrH)
04-02981:
SA2981_1216 (smbA)
08BA02176:
C248_1291 (pyrH)
11819-97:
MS7_1216 (pyrH)
6850:
RSAU_001140 (pyrH)
71193:
ST398NM01_1260
ECT-R 2:
ECTR2_1114 (pyrH)
ED133:
SAOV_1260
ED98:
SAAV_1233 (pyrH)
HO 5096 0412:
SAEMRSA15_10910 (pyrH)
JH1:
SaurJH1_1344 (pyrH)
JH9:
SaurJH9_1318 (pyrH)
JKD6008:
SAA6008_01213 (smbA)
JKD6159:
SAA6159_01113 (smbA)
LGA251:
SARLGA251_11690 (pyrH)
M013:
M013TW_1198
MRSA252:
SAR1234 (pyrH)
MSHR1132:
SAMSHR1132_11010
MSSA476:
SAS1192 (pyrH)
Mu3:
SAHV_1248 (pyrH)
Mu50:
SAV1258 (pyrH)
MW2:
MW1141 (pyrH)
RF122:
SAB1120 (pyrH)
ST398:
SAPIG1260 (pyrH)
T0131:
SAT0131_01311
TCH60:
HMPREF0772_11972 (pyrH)
TW20:
SATW20_12520 (pyrH)
USA300_TCH1516:
USA300HOU_1191 (pyrH)
VC40:
SAVC_05455 (pyrH)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ------------------MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEV
  N315            ------------------MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEV
  NCTC8325        ------------------MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEV
  Newman          MSSLLVYVTYIHDREDKKMAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEV
  USA300_FPR3757  ------------------MAQISKYKRVVLKLSGEALAGEKGFGINPVIIKSVAEQVAEV
                                    ******************************************
  
  COL             AKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
  N315            AKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
  NCTC8325        AKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
  Newman          AKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
  USA300_FPR3757  AKMDCEIAVIVGGGNIWRGKTGSDLGMDRGTADYMGMLATVMNALALQDSLEQLDCDTRV
                  ************************************************************
  
  COL             LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMG
  N315            LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMG
  NCTC8325        LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMG
  Newman          LTSIEMKQVAEPYIRRRAIRHLEKKRIVIFAAGIGNPYFSTDTTAALRAAEVEADVILMG
  USA300_FPR3757  LTSIEMKQVAEPYIRRRAIRHLEKKRVVIFAAGIGNPYFSTDTTAALRAAEVEADVILMG
                  **************************:*********************************
  
  COL             KNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFSIMEE
  N315            KNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFSIMEE
  NCTC8325        KNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFSIMEE
  Newman          KNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFSIMEE
  USA300_FPR3757  KNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPLTVFSIMEE
                  ************************************************************
  
  COL             GNIKRAVMGEKIGTLITK
  N315            GNIKRAVMGEKIGTLITK
  NCTC8325        GNIKRAVMGEKIGTLITK
  Newman          GNIKRAVMGEKIGTLITK
  USA300_FPR3757  GNIKRAVMGEKIGTLITK
                  ******************