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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003527000
- symbol?: rpsP
- synonym:
- description?: 30S ribosomal protein S16
- strand?: +
- coordinates?: 3867299..3867574
- synteny block?: BlockID0026050
- occurrence?: in 97% of 34 strains
rpsP : 30S ribosomal protein S16 [1]
• Two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S16 is also known as "bS16" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1196 (rpsP)
08BA02176:
C248_1269 (rpsP)
11819-97:
MS7_1196 (rpsP)
6850:
RSAU_001120 (rpsP)
71193:
ST398NM01_1238
ECT-R 2:
ECTR2_1094 (rpsP)
ED133:
SAOV_1241 (rpsP)
ED98:
SAAV_1211 (rpsP)
HO 5096 0412:
SAEMRSA15_10710 (rpsP)
JH1:
SaurJH1_1322 (rpsP)
JH9:
SaurJH9_1297 (rpsP)
JKD6008:
SAA6008_01193 (rpsP)
JKD6159:
SAA6159_01091 (rpsP)
JSNZ:
JSNZ_001207 (rpsP)
LGA251:
SARLGA251_11490 (rpsP)
M013:
M013TW_1176
MRSA252:
SAR1214 (rpsP)
MSHR1132:
SAMSHR1132_10810
MSSA476:
SAS1172 (rpsP)
Mu3:
SAHV_1228 (rpsP)
Mu50:
SAV1238 (rpsP)
MW2:
MW1121 (rpsP)
RF122:
SAB1102 (rpsP)
ST398:
SAPIG1238 (rpsP)
T0131:
SAT0131_01288
TCH60:
HMPREF0772_11993 (rpsP)
TW20:
SATW20_12320 (rpsP)
USA300_TCH1516:
—
VC40:
SAVC_05355 (rpsP)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKW
N315 MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKW
NCTC8325 MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKW
Newman MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKW
USA300_FPR3757 MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKW
************************************************************
COL LNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
N315 LNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
NCTC8325 LNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
Newman LNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
USA300_FPR3757 LNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
*******************************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)