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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003499000
- symbol?: fmt
- synonym:
- description?: methionyl-tRNA formyltransferase
- strand?: +
- coordinates?: 3838556..3839491
- synteny block?: BlockID0025780
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1174
08BA02176:
C248_1246
11819-97:
MS7_1174 (fmt)
6850:
RSAU_001098 (fmt)
71193:
ST398NM01_1215
ECT-R 2:
ECTR2_1072 (fmt)
ED133:
SAOV_1219
ED98:
SAAV_1188 (fmt)
HO 5096 0412:
SAEMRSA15_10490
JH1:
SaurJH1_1300
JH9:
SaurJH9_1275
JKD6008:
SAA6008_01171 (fmt)
JKD6159:
SAA6159_01069 (fmt)
LGA251:
SARLGA251_11270
M013:
M013TW_1154
MRSA252:
SAR1192
MSHR1132:
SAMSHR1132_10570
MSSA476:
SAS1150
Mu3:
SAHV_1206
Mu50:
SAV1216
MW2:
MW1099
RF122:
SAB1080 (fmt)
ST398:
SAPIG1215 (fmt)
T0131:
SAT0131_01265 (modC)
TCH60:
HMPREF0772_12016 (fmt)
TW20:
SATW20_12100
USA300_TCH1516:
USA300HOU_1153 (fmt2)
VC40:
SAVC_05245
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
N315 MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
NCTC8325 MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
Newman MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
USA300_FPR3757 MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
************************************************************
COL QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
N315 QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGGAPI
NCTC8325 QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
Newman QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
USA300_FPR3757 QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
***************************************:********************
COL HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
N315 HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
NCTC8325 HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
Newman HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
USA300_FPR3757 HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
************************************************************
COL PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
N315 PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
NCTC8325 PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
Newman PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
USA300_FPR3757 PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
************************************************************
COL NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
N315 NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
NCTC8325 NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
Newman NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
USA300_FPR3757 NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
************************************************************
COL AQNTLVGKKLI
N315 AQNTLVGKKLI
NCTC8325 AQNTLVGKKLI
Newman AQNTLVGKKLI
USA300_FPR3757 AQNTLVGKKLI
***********