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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003460000
- symbol?: sepF
- synonym:
- description?: cell division protein SepF
- cell division protein SepF
- YlmF protein
- cell division-like FtsZ-interacting protein
- YlmF
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3804525..3805088
- synteny block?: BlockID0025400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1147
08BA02176:
C248_1218
11819-97:
MS7_1146 (sepF)
6850:
RSAU_001070 (ylmF)
71193:
ST398NM01_1187
ECT-R 2:
ECTR2_1045
ED133:
SAOV_1190
ED98:
SAAV_1160
HO 5096 0412:
SAEMRSA15_10220
JH1:
SaurJH1_1273
JH9:
SaurJH9_1248
JKD6008:
SAA6008_01143 (sepF)
JKD6159:
SAA6159_01040 (sepF)
LGA251:
SARLGA251_11000 (sepF)
M013:
M013TW_1123
MRSA252:
SAR1165
MSHR1132:
SAMSHR1132_10310
MSSA476:
SAS1123
Mu3:
SAHV_1179
Mu50:
SAV1189
MW2:
MW1072
RF122:
SAB1053
ST398:
SAPIG1187
T0131:
SAT0131_01236 (topB)
TCH60:
HMPREF0772_12043 (ylmF)
TW20:
SATW20_11830 (sepF)
USA300_TCH1516:
USA300HOU_1126
VC40:
SAVC_05110
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
N315 MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
NCTC8325 MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
Newman MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
USA300_FPR3757 MSHLALKDLFSGFFVIDDEEEVEVPDKQQQVNEAPAKEQSQQTTKQNAIKSVPQKSASRY
************************************************************
COL TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
N315 TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
NCTC8325 TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
Newman TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
USA300_FPR3757 TTTSEERNNRMSNYSKNNSRNVVTMNNATPNNASQESSKMCLFEPRVFSDTQDIADELKN
************************************************************
COL RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
N315 RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
NCTC8325 RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
Newman RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
USA300_FPR3757 RRATLVNLQRIDKVSAKRIIDFLSGTVYAIGGDIQRVGTDIFLCTPDNVEVAGSITDHIE
************************************************************
COL NMEHSFD
N315 NMEHSFD
NCTC8325 NMEHSFD
Newman NMEHSFD
USA300_FPR3757 NMEHSFD
*******