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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003402000
- symbol?: efb
- synonym:
- description?: fibrinogen-binding protein
- fibrinogen-binding protein
- complement convertase inhibitor Efb
- extracellular fibrinogen/complement-binding protein
- extracellular fibrinogen-binding protein
- Extracellular fibrinogen-binding protein Efb
- fibrinogen-binding protein precursor
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3757926..3760626
- synteny block?: BlockID0024850
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1114
08BA02176:
C248_1186 (fib)
11819-97:
MS7_1114
6850:
RSAU_001040 (efb)
71193:
ST398NM01_1154
ECT-R 2:
ECTR2_1012
ED133:
SAOV_1155
ED98:
SAAV_1126 (efb)
HO 5096 0412:
SAEMRSA15_09870b (fib)
JH1:
SaurJH1_1239
JH9:
SaurJH9_1215
JKD6008:
SAA6008_01111 (efb)
JKD6159:
SAA6159_01010 (efb)
LGA251:
SARLGA251_10680 (fib)
M013:
M013TW_1090
MRSA252:
SAR1130 (fib)
MSHR1132:
SAMSHR1132_10020
MSSA476:
SAS1091
Mu3:
SAHV_1148
Mu50:
SAV1158
MW2:
MW1040
RF122:
SAB1021 (fib)
ST398:
SAPIG1154
T0131:
SAT0131_01201 (rplO)
TCH60:
HMPREF0772_12076 (efb)
TW20:
SATW20_11500 (fib)
USA300_TCH1516:
USA300HOU_1094
VC40:
SAVC_04945
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
N315 MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
NCTC8325 MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
Newman MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
USA300_FPR3757 MKNKLIAKSLLTLAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
************:***********************************************
COL PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
N315 PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
NCTC8325 PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
Newman PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
USA300_FPR3757 PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
************************************************************
COL FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
N315 FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR
NCTC8325 FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
Newman FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
USA300_FPR3757 FEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
********************************************: