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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003400000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3757148..3757654
- synteny block?: BlockID0024830
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1113
08BA02176:
C248_1185
11819-97:
MS7_1113
6850:
RSAU_001039
71193:
ST398NM01_1153
ECT-R 2:
ECTR2_1011
ED133:
SAOV_1154
ED98:
SAAV_1125
HO 5096 0412:
SAEMRSA15_09860
JH1:
SaurJH1_1238
JH9:
SaurJH9_1214
JKD6008:
SAA6008_01110
JKD6159:
SAA6159_01009
LGA251:
SARLGA251_10670
M013:
M013TW_1089
MRSA252:
SAR1129
MSHR1132:
SAMSHR1132_10010
MSSA476:
SAS1090
Mu3:
SAHV_1147
Mu50:
SAV1157
MW2:
MW1039
RF122:
SAB1020
ST398:
SAPIG1153
T0131:
SAT0131_01200
TCH60:
HMPREF0772_12077
TW20:
SATW20_11490
USA300_TCH1516:
USA300HOU_1093
VC40:
SAVC_04940
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFI
N315 MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFI
NCTC8325 MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFI
Newman MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFI
USA300_FPR3757 MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFI
************************************************************
COL TIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAV
N315 TIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAV
NCTC8325 TIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAV
Newman TIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAV
USA300_FPR3757 TIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAV
************************************************************
COL NEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
N315 NEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
NCTC8325 NEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
Newman NEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
USA300_FPR3757 NEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
************************************************