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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003391000
- symbol?: —
- synonym:
- description?: nucleoside-triphosphatase
- nucleoside-triphosphatase
- non-canonical purine NTP pyrophosphatase
- HAM-domain purine NTP pyrophosphatase, putative
- XTP/dITP diphosphatase
- Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific)
- deoxyribonucleotide triphosphate pyrophosphatase
- non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
- RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
- Xanthosine triphosphate pyrophosphatase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3753580..3754167
- synteny block?: BlockID0024740
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1107 (rdgB)
08BA02176:
C248_1180
11819-97:
MS7_1108 (rdgB)
6850:
RSAU_001035
71193:
ST398NM01_1147
ECT-R 2:
ECTR2_1005 (rdgB)
ED133:
SAOV_1148
ED98:
SAAV_1119
HO 5096 0412:
SAEMRSA15_09810
JH1:
SaurJH1_1232
JH9:
SaurJH9_1210
JKD6008:
SAA6008_01105
JKD6159:
SAA6159_01005
LGA251:
SARLGA251_10630
M013:
M013TW_1084
MRSA252:
SAR1124
MSHR1132:
SAMSHR1132_09970
MSSA476:
SAS1085
Mu3:
SAHV_1142
Mu50:
SAV1152
MW2:
MW1034
RF122:
SAB1015
ST398:
SAPIG1147 (rdgB)
T0131:
SAT0131_01194 (rpsM)
TCH60:
HMPREF0772_12082 (ynbD)
TW20:
SATW20_11450
USA300_TCH1516:
USA300HOU_1087
VC40:
SAVC_04920
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
N315 MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
NCTC8325 MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
Newman MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
USA300_FPR3757 MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
************************************************************
COL NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
N315 NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
NCTC8325 NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
Newman NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
USA300_FPR3757 NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
************************************************************
COL MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
N315 MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
NCTC8325 MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
Newman MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
USA300_FPR3757 MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
************************************************************
COL AINLLQAFLEGDKNV
N315 AINLLQAFLEGEKNV
NCTC8325 AINLLQAFLEGDKNV
Newman AINLLQAFLEGDKNV
USA300_FPR3757 AINLLQAFLEGDKNV
***********:***