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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003319000
- symbol?: pdhC
- synonym:
- description?: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
- dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
- branched-chain alpha-keto acid dehydrogenase subunit E2
- 2-oxo acid dehydrogenase subunit E2
- branched-chain alpha-keto acid dehydrogenase E2
- branched-chain alpha-keto acid dehydrogenase E2 subunit
- pyruvate dehydrogenase complex E2, dihydrolipoamide S-acetyltransferase component PdhC
- Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
- dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex (E2) (Dihydrolipoamideacetyltransferase component of pyruvate dehydrogenase complex)
- pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
- pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3686647..3687939
- synteny block?: BlockID0024030
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1052 (pdhC)
08BA02176:
C248_1122 (pdhC)
11819-97:
MS7_1052 (pdhC)
6850:
RSAU_000980 (pdhC)
71193:
ST398NM01_1092
ECT-R 2:
ECTR2_950
ED133:
SAOV_1039
ED98:
SAAV_1060
HO 5096 0412:
SAEMRSA15_09250 (pdhC)
JH1:
SaurJH1_1177
JH9:
SaurJH9_1155
JKD6008:
SAA6008_01050 (pdhC)
JKD6159:
SAA6159_00951 (pdhC)
LGA251:
SARLGA251_10080 (pdhC)
M013:
M013TW_1027
MRSA252:
SAR1069 (pdhC)
MSHR1132:
SAMSHR1132_09420
MSSA476:
SAS1030
Mu3:
SAHV_1087 (pdhC)
Mu50:
SAV1095 (pdhC)
MW2:
MW0978 (pdhC)
RF122:
SAB0961 (pdhC)
ST398:
SAPIG1092
T0131:
SAT0131_01132
TCH60:
HMPREF0772_12137 (pdhC)
TW20:
SATW20_10900 (pdhC)
USA300_TCH1516:
USA300HOU_1038 (pdhC)
VC40:
SAVC_04635
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM
N315 MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM
NCTC8325 MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPASGTVEEVM
Newman MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM
USA300_FPR3757 MAFEFRLPDIGEGIHEGEIVKWFVKAGDTIEEDDVLAEVQNDKSVVEIPSPVSGTVEEVM
***************************************************.********
COL VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE
N315 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE
NCTC8325 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE
Newman VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE
USA300_FPR3757 VEEGTVAVVGDVIVKIDAPDAEDMQFKGHDDDSSSKEEPAKEEAPAEQAPVATQTEEVDE
************************************************************
COL NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE
N315 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE
NCTC8325 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE
Newman NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE
USA300_FPR3757 NRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAASATSE
************************************************************
COL EVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDH
N315 EVAETPAAPAAVSLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDH
NCTC8325 EVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDH
Newman EVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDH
USA300_FPR3757 EVAETPAAPAAVTLEGDFPETTEKIPAMRRAIAKAMVNSKHTAPHVTLMDEIDVQALWDH
************:***********************************************
COL RKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADT
N315 RKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADT
NCTC8325 RKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADT
Newman RKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADT
USA300_FPR3757 RKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYWNIGIAADT
************************************************************
COL DRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFT
N315 DRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFT
NCTC8325 DRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFT
Newman DRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFT
USA300_FPR3757 DRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFT
************************************************************
COL PVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLL
N315 PVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLL
NCTC8325 PVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLL
Newman PVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLL
USA300_FPR3757 PVINHPEVAILGIGRIAQKPIVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLL
************************************************************
COL NNPELLLMEG
N315 NNPELLLMEG
NCTC8325 NNPELLLMEG
Newman NNPELLLMEG
USA300_FPR3757 NNPELLLMEG
**********