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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003317000
- symbol?: pdhA
- synonym:
- description?: pyruvate dehydrogenase E1 component subunit alpha
- pyruvate dehydrogenase E1 component subunit alpha
- pyruvate dehydrogenase E1 component, alpha subunit
- pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
- pyruvate dehydrogenase complex, E1 component subunit alpha
- pyruvate dehydrogenase complex E1 component, alpha subunit PdhA
- pyruvate dehydrogenase complex E1 component subunit alpha
- pyruvate dehydrogenase E1 component alpha subunit
- putative pyruvate dehydrogenase E1 component,alpha subunit
- putative pyruvate dehydrogenase E1 component subunit alpha
- pyrubate dehydrogenase E1 component alpha subunit
- pyruvate dehydrogenase (acetyl-transferring)
- pyruvate dehydrogenase (acetyl-transferring) alpha subunit
- pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit
- pyruvate dehydrogenase complex E1 component, alpha subunit
- pyruvate dehydrogenase complex E1 component alpha subunit
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3684463..3685575
- synteny block?: BlockID0024010
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1050 (pdhA)
08BA02176:
C248_1120 (pdhA)
11819-97:
MS7_1050 (pdhA)
6850:
RSAU_000978 (pdhA)
71193:
ST398NM01_1090
ECT-R 2:
ECTR2_948 (pdhA)
ED133:
SAOV_1037
ED98:
SAAV_1058 (pdhA)
HO 5096 0412:
SAEMRSA15_09230 (pdhA)
JH1:
SaurJH1_1175
JH9:
SaurJH9_1153
JKD6008:
SAA6008_01048 (pdhA)
JKD6159:
SAA6159_00949 (pdhA)
LGA251:
SARLGA251_10060 (pdhA)
M013:
M013TW_1025
MRSA252:
SAR1067 (pdhA)
MSHR1132:
SAMSHR1132_09400
MSSA476:
SAS1028
Mu3:
SAHV_1085 (pdhA)
Mu50:
SAV1093 (pdhA)
MW2:
MW0976
RF122:
SAB0959 (pdhA)
ST398:
SAPIG1090 (pdhA)
T0131:
SAT0131_01130
TCH60:
HMPREF0772_12139 (pdhA)
TW20:
SATW20_10880 (pdhA)
USA300_TCH1516:
USA300HOU_1036 (pdhA)
VC40:
SAVC_04625
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRI
N315 MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRI
NCTC8325 MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRI
Newman MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRI
USA300_FPR3757 MAPKLQAQFDAVKVLNDTQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRI
************************************************************
COL LDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTEA
N315 LDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTEA
NCTC8325 LDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTEA
Newman LDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTEA
USA300_FPR3757 LDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPLTEA
************************************************************
COL FLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQ
N315 FLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQ
NCTC8325 FLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQ
Newman FLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQ
USA300_FPR3757 FLFSRGHFKGNQFPEGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQ
************************************************************
COL GDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDA
N315 GDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDA
NCTC8325 GDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDA
Newman GDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDA
USA300_FPR3757 GDFYEGINFAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDA
************************************************************
COL LAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVR
N315 LAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVR
NCTC8325 LAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVR
Newman LAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVR
USA300_FPR3757 LAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVR
************************************************************
COL FRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQ
N315 FRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQ
NCTC8325 FRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQ
Newman FRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQ
USA300_FPR3757 FRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQ
************************************************************
COL YEIYKEKESK
N315 YEIYKEKESK
NCTC8325 YEIYKEKESK
Newman YEIYKEKESK
USA300_FPR3757 YEIYKEKESK
**********