PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003308000
• symbol^?: ktrA
• synonym:
• description^?: potassium transporter Trk

  descriptions from strain specific annotations:

  • potassium transporter Trk
  • TrkA family potassium uptake protein
  • potassium uptake protein
  • TrkA family potassium uptake protein, putative
  • TrkA potassium uptake family protein
  • Trk system potassium uptake protein trkA
  • ktr system potassium uptake protein A
  • NAD+ binding potassium transporter
  • potassium transport protein
  • potassium uptake protein TrkA
  • pottasium uptake protein KtrA
  • putative potassium transport protein
  • trkA-C domain protein
  • TrkA domain-containing protein
  • TrkA-N domain-containing protein
  • Trk family K+ transporter NAD+ binding protein
  • Trk family potassium (K+) transporter, NAD+ binding protein
• strand^?: +
• coordinates^?: 3679132..3679794
• synteny block^?: BlockID0023920
• occurrence^?: in 100% of 34 strains

⊟Orthologs

COL:
SACOL1096
N315:
SA0939
NCTC8325:
SAOUHSC_01034
Newman:
NWMN_0954
USA300_FPR3757:
SAUSA300_0988 (trkA)
JSNZ:
JSNZ_001052
04-02981:
SA2981_1044 (trkA)
08BA02176:
C248_1114
11819-97:
MS7_1045 (ktrA)
6850:
RSAU_000973
71193:
ST398NM01_1085
ECT-R 2:
ECTR2_943
ED133:
SAOV_1032
ED98:
SAAV_1053
HO 5096 0412:
SAEMRSA15_09180
JH1:
SaurJH1_1170
JH9:
SaurJH9_1148
JKD6008:
SAA6008_01043 (trkA)
JKD6159:
SAA6159_00944 (trkA)
LGA251:
SARLGA251_10010
M013:
M013TW_1020
MRSA252:
SAR1061
MSHR1132:
SAMSHR1132_09350
MSSA476:
SAS1023
Mu3:
SAHV_1080
Mu50:
SAV1088
MW2:
MW0970
RF122:
SAB0954
ST398:
SAPIG1085
T0131:
SAT0131_01125
TCH60:
HMPREF0772_12145 (ktrA)
TW20:
SATW20_10830
USA300_TCH1516:
USA300HOU_1030
VC40:
SAVC_04600

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMK
  N315            MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMK
  NCTC8325        MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMK
  Newman          MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMK
  USA300_FPR3757  MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMK
                  ************************************************************
  
  COL             SLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHP
  N315            SLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHP
  NCTC8325        SLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHP
  Newman          SLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHP
  USA300_FPR3757  SLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHP
                  ************************************************************
  
  COL             ERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIK
  N315            ERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIK
  NCTC8325        ERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIK
  Newman          ERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIK
  USA300_FPR3757  ERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIK
                  ************************************************************
  
  COL             RGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
  N315            RGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
  NCTC8325        RGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
  Newman          RGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
  USA300_FPR3757  RGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
                  ****************************************