⊟Summary[edit | edit source]

pan ID^?: SAUPAN003306000
symbol^?: cydA
synonym:
description^?: cytochrome ubiquinol oxidase subunit I
- cytochrome ubiquinol oxidase subunit I
- cytochrome D ubiquinol oxidase, subunit I
- cytochrome d ubiquinol oxidase subunit I
- cytochrome d ubiquinol oxidase, subunit I, putative
- bacterial Cytochrome Ubiquinol Oxidase family protein
- cytochrome bd ubiquinol oxidase, subunit I
- cytochrome bd ubiquinol oxidase subunit I
- cytochrome D ubiquinol oxidase subunit 1-like protein
- cytochrome ubiquinol oxidase
- Cytochrome Ubiquinol Oxidase family protein
- putative cytochrome ubiquinol oxidase
strand^?: +
coordinates^?: 3676622..3677983
synteny block^?: BlockID0023900
occurrence^?: in 100% of 34 strains

cydA (cbdA) : cytochrome bd ubiquinol oxidase subunit I ^[1]

⊟Orthologs[edit | edit source]

COL:

SACOL1094 (cydA)

N315:

SA0937

NCTC8325:

SAOUHSC_01031

Newman:

NWMN_0952 (cydA)

USA300_FPR3757:

SAUSA300_0986

JSNZ:

JSNZ_001050

04-02981:

SA2981_1042

08BA02176:

C248_1112

11819-97:

MS7_1043

6850:

RSAU_000971 (cydA)

71193:

ST398NM01_1083

ECT-R 2:

ECTR2_941

ED133:

SAOV_1030

ED98:

SAAV_1051 (cydA)

HO 5096 0412:

SAEMRSA15_09160

JH1:

SaurJH1_1168

JH9:

SaurJH9_1146

JKD6008:

SAA6008_01041

JKD6159:

SAA6159_00942

LGA251:

SARLGA251_09990

M013:

M013TW_1018

MRSA252:

SAR1059

MSHR1132:

SAMSHR1132_09330

MSSA476:

SAS1021

Mu3:

SAHV_1078

Mu50:

SAV1086

MW2:

MW0968

RF122:

SAB0952

ST398:

SAPIG1083

T0131:

SAT0131_01122

TCH60:

HMPREF0772_12147 (cydA)

TW20:

SATW20_10810

USA300_TCH1516:

USA300HOU_1028 (cydA)

VC40:

SAVC_04590

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.505)

COL             MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
N315            MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
NCTC8325        MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
Newman          MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
USA300_FPR3757  MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
JSNZ            MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
                ************************************************************

COL             TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
N315            TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
NCTC8325        TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
Newman          TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
USA300_FPR3757  TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
JSNZ            TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
                ************************************************************

COL             NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
N315            NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
NCTC8325        NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
Newman          NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
USA300_FPR3757  NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
JSNZ            NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
                ************************************************************

COL             SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
N315            SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
NCTC8325        SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
Newman          SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
USA300_FPR3757  SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
JSNZ            SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
                ************************************************************

COL             SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
N315            SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
NCTC8325        SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
Newman          SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
USA300_FPR3757  SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
JSNZ            SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
                ************************************************************

COL             TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
N315            TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
NCTC8325        TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
Newman          TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
USA300_FPR3757  TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
JSNZ            TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
                ************************************************************

COL             GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
N315            GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
NCTC8325        GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
Newman          GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
USA300_FPR3757  GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
JSNZ            GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
                ************************************************************

COL             YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
N315            YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
NCTC8325        YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
Newman          YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
USA300_FPR3757  YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
JSNZ            YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
                *********************************

↑ Neal D Hammer, Michelle L Reniere, James E Cassat, Yaofang Zhang, Amanda O Hirsch, M Indriati Hood, Eric P Skaar
Two heme-dependent terminal oxidases power Staphylococcus aureus organ-specific colonization of the vertebrate host.
mBio: 2013, 4(4);
[PubMed:23900169] [WorldCat.org] [DOI] (I e)Neal D Hammer, Lici A Schurig-Briccio, Svetlana Y Gerdes, Robert B Gennis, Eric P Skaar
CtaM Is Required for Menaquinol Oxidase aa3 Function in Staphylococcus aureus.
mBio: 2016, 7(4);
[PubMed:27406563] [WorldCat.org] [DOI] (I e)Yujin Suzuki, Miki Kawada-Matsuo, Mi Nguyen-Tra Le, Sopongselamuny Eng, Junzo Hisatsune, Motoyuki Sugai, Takemasa Sakaguchi, Hitoshi Komatsuzawa
The two-component regulatory systems GraRS and SrrAB mediate Staphylococcus aureus susceptibility to Pep5 produced by clinical isolate of Staphylococcus epidermidis.
Appl Environ Microbiol: 2024, 90(7);e0030024
[PubMed:38832774] [WorldCat.org] [DOI] (I p)

[1] Neal D Hammer, Michelle L Reniere, James E Cassat, Yaofang Zhang, Amanda O Hirsch, M Indriati Hood, Eric P Skaar
Two heme-dependent terminal oxidases power Staphylococcus aureus organ-specific colonization of the vertebrate host.
mBio: 2013, 4(4);
[PubMed:23900169] [WorldCat.org] [DOI] (I e)Neal D Hammer, Lici A Schurig-Briccio, Svetlana Y Gerdes, Robert B Gennis, Eric P Skaar
CtaM Is Required for Menaquinol Oxidase aa3 Function in Staphylococcus aureus.
mBio: 2016, 7(4);
[PubMed:27406563] [WorldCat.org] [DOI] (I e)Yujin Suzuki, Miki Kawada-Matsuo, Mi Nguyen-Tra Le, Sopongselamuny Eng, Junzo Hisatsune, Motoyuki Sugai, Takemasa Sakaguchi, Hitoshi Komatsuzawa
The two-component regulatory systems GraRS and SrrAB mediate Staphylococcus aureus susceptibility to Pep5 produced by clinical isolate of Staphylococcus epidermidis.
Appl Environ Microbiol: 2024, 90(7);e0030024
[PubMed:38832774] [WorldCat.org] [DOI] (I p)

[1]

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

Search

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]