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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003306000
- symbol?: cydA
- synonym:
- description?: cytochrome ubiquinol oxidase subunit I
- cytochrome ubiquinol oxidase subunit I
- cytochrome D ubiquinol oxidase, subunit I
- cytochrome d ubiquinol oxidase subunit I
- cytochrome d ubiquinol oxidase, subunit I, putative
- bacterial Cytochrome Ubiquinol Oxidase family protein
- cytochrome bd ubiquinol oxidase, subunit I
- cytochrome bd ubiquinol oxidase subunit I
- cytochrome D ubiquinol oxidase subunit 1-like protein
- cytochrome ubiquinol oxidase
- Cytochrome Ubiquinol Oxidase family protein
- putative cytochrome ubiquinol oxidase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3676622..3677983
- synteny block?: BlockID0023900
- occurrence?: in 100% of 34 strains
cydA (cbdA) : cytochrome bd ubiquinol oxidase subunit I [1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1042
08BA02176:
C248_1112
11819-97:
MS7_1043
6850:
RSAU_000971 (cydA)
71193:
ST398NM01_1083
ECT-R 2:
ECTR2_941
ED133:
SAOV_1030
ED98:
SAAV_1051 (cydA)
HO 5096 0412:
SAEMRSA15_09160
JH1:
SaurJH1_1168
JH9:
SaurJH9_1146
JKD6008:
SAA6008_01041
JKD6159:
SAA6159_00942
LGA251:
SARLGA251_09990
M013:
M013TW_1018
MRSA252:
SAR1059
MSHR1132:
SAMSHR1132_09330
MSSA476:
SAS1021
Mu3:
SAHV_1078
Mu50:
SAV1086
MW2:
MW0968
RF122:
SAB0952
ST398:
SAPIG1083
T0131:
SAT0131_01122
TCH60:
HMPREF0772_12147 (cydA)
TW20:
SATW20_10810
USA300_TCH1516:
USA300HOU_1028 (cydA)
VC40:
SAVC_04590
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
N315 MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
NCTC8325 MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
Newman MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
USA300_FPR3757 MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
************************************************************
COL TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
N315 TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
NCTC8325 TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
Newman TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
USA300_FPR3757 TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
************************************************************
COL NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
N315 NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
NCTC8325 NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
Newman NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
USA300_FPR3757 NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
************************************************************
COL SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
N315 SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
NCTC8325 SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
Newman SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
USA300_FPR3757 SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
************************************************************
COL SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
N315 SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
NCTC8325 SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
Newman SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
USA300_FPR3757 SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVK
************************************************************
COL TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
N315 TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
NCTC8325 TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
Newman TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
USA300_FPR3757 TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
************************************************************
COL GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
N315 GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
NCTC8325 GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
Newman GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
USA300_FPR3757 GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
************************************************************
COL YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
N315 YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
NCTC8325 YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
Newman YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
USA300_FPR3757 YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
*********************************
- ↑ Neal D Hammer, Michelle L Reniere, James E Cassat, Yaofang Zhang, Amanda O Hirsch, M Indriati Hood, Eric P Skaar
Two heme-dependent terminal oxidases power Staphylococcus aureus organ-specific colonization of the vertebrate host.
mBio: 2013, 4(4);
[PubMed:23900169] [WorldCat.org] [DOI] (I e)Neal D Hammer, Lici A Schurig-Briccio, Svetlana Y Gerdes, Robert B Gennis, Eric P Skaar
CtaM Is Required for Menaquinol Oxidase aa3 Function in Staphylococcus aureus.
mBio: 2016, 7(4);
[PubMed:27406563] [WorldCat.org] [DOI] (I e)Yujin Suzuki, Miki Kawada-Matsuo, Mi Nguyen-Tra Le, Sopongselamuny Eng, Junzo Hisatsune, Motoyuki Sugai, Takemasa Sakaguchi, Hitoshi Komatsuzawa
The two-component regulatory systems GraRS and SrrAB mediate Staphylococcus aureus susceptibility to Pep5 produced by clinical isolate of Staphylococcus epidermidis.
Appl Environ Microbiol: 2024, 90(7);e0030024
[PubMed:38832774] [WorldCat.org] [DOI] (I p)