PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003287000
• symbol^?: purD
• synonym:
• description^?: phosphoribosylamine--glycine ligase

  descriptions from strain specific annotations:

  • phosphoribosylamine--glycine ligase
  • phosphoribosylamine--glycine ligase PurD
  • phosphoribosylamine--glycine ligase (GARS) (Glycinamideribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)
  • putative phosphoribosylamine--glycine ligase
• strand^?: +
• coordinates^?: 3662459..3663697
• synteny block^?: BlockID0023710
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1083 (purD)
N315:
SA0926 (purD)
NCTC8325:
SAOUHSC_01018
Newman:
NWMN_0942 (purD)
USA300_FPR3757:
SAUSA300_0976 (purD)
04-02981:
SA2981_1030 (purD)
08BA02176:
C248_1099 (purD)
11819-97:
MS7_1032 (purD)
6850:
RSAU_000961 (purD)
71193:
ST398NM01_1072
ECT-R 2:
ECTR2_930 (purD)
ED133:
SAOV_1019
ED98:
SAAV_1039 (purD)
HO 5096 0412:
SAEMRSA15_09050 (purD)
JH1:
SaurJH1_1156
JH9:
SaurJH9_1134
JKD6008:
SAA6008_01030 (purD)
JKD6159:
SAA6159_00930 (purD)
LGA251:
SARLGA251_09880 (purD)
M013:
M013TW_1006
MRSA252:
SAR1048 (purD)
MSHR1132:
SAMSHR1132_09220
MSSA476:
SAS1010
Mu3:
SAHV_1066 (purD)
Mu50:
SAV1074 (purD)
MW2:
MW0957 (purD)
RF122:
SAB0941 (purD)
ST398:
SAPIG1072 (purD)
T0131:
SAT0131_01110
TCH60:
HMPREF0772_12159 (purD)
TW20:
SATW20_10700 (purD)
USA300_TCH1516:
USA300HOU_1018 (purD)
VC40:
SAVC_04535

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISEPDHQAILDFAK
  N315            ------------------------------------MTPIAEVHTEISESNHQGILDFAK
  NCTC8325        MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAK
  Newman          MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISEPDHQAILDFAK
  USA300_FPR3757  MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAK
                                                      *************.:**.******
  
  COL             RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
  N315            QQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMKKYNIPTAD
  NCTC8325        RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
  Newman          RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
  USA300_FPR3757  RQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTAD
                  :**************************************************:********
  
  COL             YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
  N315            YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
  NCTC8325        YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
  Newman          YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
  USA300_FPR3757  YKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVV
                  ************************************************************
  
  COL             FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
  N315            FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
  NCTC8325        FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
  Newman          FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
  USA300_FPR3757  FETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVL
                  ************************************************************
  
  COL             KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
  N315            KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
  NCTC8325        KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
  Newman          KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
  USA300_FPR3757  KLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMES
                  ************************************************************
  
  COL             DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
  N315            DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
  NCTC8325        DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
  Newman          DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
  USA300_FPR3757  DLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKK
                  ************************************************************
  
  COL             QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
  N315            QGDTFVTSGGRVILAIGKGDNVQDAQRDAYEKVSQIQSDHLFYRHDIANKALQLK
  NCTC8325        QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
  Newman          QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
  USA300_FPR3757  QGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
                  ******************************:************************