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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003211000
- symbol?: comK1
- synonym:
- description?: competence protein ComK
- competence protein ComK
- ComK family protein
- competence transcription factor
- competence transcription factor ComK, putative
- competence transcription factor ComK-like protein
- competence protein
- competence transcription regulator ComK
- putative regulatory protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3599011..3599541
- synteny block?: BlockID0022970
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0979
08BA02176:
C248_1050
11819-97:
MS7_0983
6850:
RSAU_000912 (comK)
71193:
ST398NM01_1023
ECT-R 2:
ECTR2_882
ED133:
SAOV_0971c
ED98:
SAAV_0990
HO 5096 0412:
SAEMRSA15_08550
JH1:
SaurJH1_1106
JH9:
SaurJH9_1084
JKD6008:
SAA6008_00980 (comK)
JKD6159:
SAA6159_00881 (comK)
LGA251:
SARLGA251_09400
M013:
M013TW_0954
MRSA252:
SAR0995
MSHR1132:
SAMSHR1132_08720
MSSA476:
SAS0958
Mu3:
SAHV_1019
Mu50:
SAV1026
MW2:
MW0906
RF122:
SAB0891c
ST398:
SAPIG1023 (comK)
T0131:
SAT0131_01060
TCH60:
HMPREF0772_12209 (comK)
TW20:
SATW20_10220
USA300_TCH1516:
USA300HOU_0983
VC40:
SAVC_04290
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -------------MVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTY
N315 MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTY
NCTC8325 -------------MVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTY
Newman MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTY
USA300_FPR3757 -------------MVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTY
***********************************************
COL LGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCK
N315 LGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCK
NCTC8325 LGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCK
Newman LGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCK
USA300_FPR3757 LGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCK
************************************************************
COL VTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKATLNVFEAL
N315 VTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKATLNVFEAL
NCTC8325 VTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKATLNVFEAL
Newman VTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKATLNVFEAL
USA300_FPR3757 VTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKATLNVFEAL
************************************************************
COL TRYSLFEDK
N315 TRYSLFEDK
NCTC8325 TRYSLFEDK
Newman TRYSLFEDK
USA300_FPR3757 TRYSLFEDK
*********