Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003163000
- symbol?: trpS
- synonym:
- description?: tryptophanyl-tRNA synthetase
- tryptophanyl-tRNA synthetase
- tryptophan--tRNA ligase
- proteobacterial type
- putative tryptophanyl-tRNA synthetase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3556710..3557699
- synteny block?: BlockID0022510
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0951 (trpS)
08BA02176:
C248_1019 (trpS)
11819-97:
MS7_0952 (trpS)
6850:
RSAU_000872 (trpS)
71193:
ST398NM01_0992
ECT-R 2:
ECTR2_851 (trpS)
ED133:
SAOV_0942c
ED98:
SAAV_0957
HO 5096 0412:
SAEMRSA15_08260 (trpS)
JH1:
SaurJH1_1014
JH9:
SaurJH9_0995
JKD6008:
SAA6008_00949 (trpS)
JKD6159:
SAA6159_00853 (trpS)
LGA251:
SARLGA251_09120 (trpS)
M013:
M013TW_0919
MRSA252:
SAR0964 (trpS)
MSHR1132:
SAMSHR1132_08440
MSSA476:
SAS0866
Mu3:
SAHV_0991 (trpS)
Mu50:
SAV0996 (trpS)
MW2:
MW0878 (trpS)
RF122:
SAB0863c (trpS)
ST398:
SAPIG0992 (trpS)
T0131:
SAT0131_01031
TCH60:
HMPREF0772_12240 (trpS)
TW20:
SATW20_09940 (trpS)
USA300_TCH1516:
USA300HOU_0954 (trpS)
VC40:
SAVC_04150
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAITMPQDRLKLRKQTRQ
N315 METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAITMPQDRLKLRKQTRQ
NCTC8325 METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAITMPQDRLKLRKQTRQ
Newman METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAITMPQDRLKLRKQTRQ
USA300_FPR3757 METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAITMPQDRLKLRKQTRQ
************************************************************
COL LAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIP
N315 LAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIP
NCTC8325 LAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIP
Newman LAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIP
USA300_FPR3757 LAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIP
************************************************************
COL AGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKV
N315 AGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKV
NCTC8325 AGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKV
Newman AGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKV
USA300_FPR3757 AGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKV
************************************************************
COL GGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGIT
N315 GGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGIT
NCTC8325 GGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGIT
Newman GGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGIT
USA300_FPR3757 GGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGIT
************************************************************
COL NLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEIVKAFLVEFQEKYESFYNSDKLDDI
N315 NLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEIVKAFLVEFQEKYESFYNSDKLDDI
NCTC8325 NLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEIVKAFLVEFQEKYESFYNSDKLDDI
Newman NLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEIVKAFLVEFQEKYESFYNSDKLDDI
USA300_FPR3757 NLISIYAGLTDMPIKDIEAKYEGEGYGKFKGDLAEIVKAFLVEFQEKYESFYNSDKLDDI
************************************************************
COL LDQGRDKAHKVSFKTVKKMEKAMGLGRKR
N315 LDQGRDKAHKVSFKTVKKMEKAMGLGRKR
NCTC8325 LDQGRDKAHKVSFKTVKKMEKAMGLGRKR
Newman LDQGRDKAHKVSFKTVKKMEKAMGLGRKR
USA300_FPR3757 LDQGRDKAHKVSFKTVKKMEKAMGLGRKR
*****************************