PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003060000
• symbol^?: gudB
• synonym:
• description^?: NAD-specific glutamate dehydrogenase

  descriptions from strain specific annotations:

  • NAD-specific glutamate dehydrogenase
  • glutamate dehydrogenase
  • NAD-specific glutamate dehydrogenase, putative
  • Glu/Leu/Phe/Val dehydrogenase
  • glutamate dehydrogenase, NAD-specific
  • NAD-specific glutamate dehydrogenase (NAD-GDH)
  • putative NAD-specific glutamate dehydrogenase
• strand^?: +
• coordinates^?: 3450285..3451571
• synteny block^?: BlockID0021680
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0961 (gluD)
N315:
SA0819 (gudB)
NCTC8325:
SAOUHSC_00895
Newman:
NWMN_0828 (gudB)
USA300_FPR3757:
SAUSA300_0861 (gudB)
04-02981:
SA2981_0913 (gudB)
08BA02176:
C248_0957
11819-97:
MS7_0913 (gluD)
6850:
RSAU_000835 (gluD)
71193:
ST398NM01_0941
ECT-R 2:
ECTR2_814
ED133:
SAOV_0904
ED98:
SAAV_0919 (gluD)
HO 5096 0412:
SAEMRSA15_07880
JH1:
SaurJH1_0977
JH9:
SaurJH9_0958
JKD6008:
SAA6008_00911 (gudB)
JKD6159:
SAA6159_00817 (gudB)
LGA251:
SARLGA251_08760
M013:
M013TW_0877
MRSA252:
SAR0920
MSHR1132:
SAMSHR1132_08100
MSSA476:
SAS0828
Mu3:
SAHV_0953 (gudB)
Mu50:
SAV0958 (gudB)
MW2:
MW0840 (gudB)
RF122:
SAB0825
ST398:
SAPIG0941
T0131:
SAT0131_00990
TCH60:
HMPREF0772_12288 (gluD)
TW20:
SATW20_09580
USA300_TCH1516:
USA300HOU_0917 (gudB)
VC40:
SAVC_03965

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             --------------MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVR
  N315            --------------MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVR
  NCTC8325        --------------MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVR
  Newman          MKAKSLGKEEAKRIMTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVR
  USA300_FPR3757  --------------MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVR
                                **********************************************
  
  COL             MDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGK
  N315            MDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGK
  NCTC8325        MDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGK
  Newman          MDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGK
  USA300_FPR3757  MDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGK
                  ************************************************************
  
  COL             GGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDK
  N315            GGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDK
  NCTC8325        GGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDK
  Newman          GGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDK
  USA300_FPR3757  GGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDK
                  ************************************************************
  
  COL             FNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFL
  N315            FNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFL
  NCTC8325        FNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFL
  Newman          FNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFL
  USA300_FPR3757  FNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFL
                  ************************************************************
  
  COL             AKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDC
  N315            AKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDC
  NCTC8325        AKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDC
  Newman          AKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDC
  USA300_FPR3757  AKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDC
                  ************************************************************
  
  COL             DILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT
  N315            DILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT
  NCTC8325        DILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT
  Newman          DILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT
  USA300_FPR3757  DILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT
                  ************************************************************
  
  COL             VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAE
  N315            VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAE
  NCTC8325        VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAE
  Newman          VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAE
  USA300_FPR3757  VSYFEWVQNNQGYYWSEEEVDEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAE
                  ********************:***************************************
  
  COL             AARYRGWA
  N315            AARYRGWA
  NCTC8325        AARYRGWA
  Newman          AARYRGWA
  USA300_FPR3757  AARYRGWA
                  ********