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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003028000
- symbol?: —
- synonym:
- description?: D-glycerate dehydrogenase
- D-glycerate dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein
- glycerate dehydrogenase-like protein
- Glyoxylate reductase / Glyoxylate reductase / Hydroxypyruvate reductase
- D-isomer specific 2-hydroxyacid dehydrogenase family protein
- D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
- D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
- glycerate dehydrogenase
- glyoxylate/hydroxypyruvate reductase B
- glyoxylate reductase (Glycolate reductase)
- glyoxylate reductase (NAD+)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3419341..3420300
- synteny block?: BlockID0021360
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0885
08BA02176:
C248_0929
11819-97:
MS7_0885
6850:
RSAU_000808
71193:
ST398NM01_0913
ECT-R 2:
ECTR2_786
ED133:
SAOV_0876
ED98:
SAAV_0890
HO 5096 0412:
SAEMRSA15_07600
JH1:
SaurJH1_0948
JH9:
SaurJH9_0929
JKD6008:
SAA6008_00881
JKD6159:
SAA6159_00789
LGA251:
SARLGA251_08480
M013:
M013TW_0849
MRSA252:
SAR0892
MSHR1132:
SAMSHR1132_07820
MSSA476:
SAS0800
Mu3:
SAHV_0925
Mu50:
SAV0930
MW2:
MW0812
RF122:
SAB0796
ST398:
SAPIG0913
T0131:
SAT0131_00960 (alr)
TCH60:
HMPREF0772_12317 (ghrB)
TW20:
SATW20_09300
USA300_TCH1516:
USA300HOU_0890
VC40:
SAVC_03825
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALRDADACFITLSEQIDAE
N315 MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALRDADACFITLSEQIDAE
NCTC8325 -------------------------MWQKSLVPMPKDQFVTALRDADACFITLSEQIDAE
Newman MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALRDADACFITLSEQIDAE
USA300_FPR3757 MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALRDADACFITLSEQIDAE
***********************************
COL ILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIV
N315 ILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIV
NCTC8325 ILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIV
Newman ILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIV
USA300_FPR3757 ILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIV
************************************************************
COL EAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRSRH
N315 EAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRSRH
NCTC8325 EAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRSRH
Newman EAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRSRH
USA300_FPR3757 EAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRSRH
************************************************************
COL KDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRGQI
N315 KDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRGQI
NCTC8325 KDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRGQI
Newman KDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRGQI
USA300_FPR3757 KDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRGQI
************************************************************
COL VDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMIQL
N315 VDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMIQL
NCTC8325 VDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMIQL
Newman VDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMIQL
USA300_FPR3757 VDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMIQL
************************************************************
COL CINNIEAVMTNQVPHTPVN
N315 CINNIEAVMTNQVPHTPVN
NCTC8325 CINNIEAVMTNQVPHTPVN
Newman CINNIEAVMTNQVPHTPVN
USA300_FPR3757 CINNIEAVMTNQVPHTPVN
*******************