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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003027000
- symbol?: nagD
- synonym:
- description?: TIGR01457 family HAD-type hydrolase
- TIGR01457 family HAD-type hydrolase
- HAD superfamily hydrolase
- hydrolase
- N-acetyl-glucosamine catabolism-like protein
- 4-nitrophenylphosphatase
- HAD family hydrolase
- HAD hydrolase, IIA family protein
- HAD-superfamily hydrolase, subfamily IIA family protein
- HAD-superfamily subfamily IIA hydrolase
- haloacid dehalogenase
- haloacid dehalogenase-like hydrolase
- NagD-like phosphatase
- Protein nagD -like protein
- putative NagD-like phosphatase
- pyridoxal phosphate phosphatase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3418528..3419307
- synteny block?: BlockID0021350
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0884
08BA02176:
C248_0928
11819-97:
MS7_0884
6850:
RSAU_000807 (nagD)
71193:
ST398NM01_0912
ECT-R 2:
ECTR2_785
ED133:
SAOV_0875
ED98:
SAAV_0889
HO 5096 0412:
SAEMRSA15_07590
JH1:
SaurJH1_0947
JH9:
SaurJH9_0928
JKD6008:
SAA6008_00880
JKD6159:
SAA6159_00788
LGA251:
SARLGA251_08470
M013:
M013TW_0848
MRSA252:
SAR0891
MSHR1132:
SAMSHR1132_07810
MSSA476:
SAS0799
Mu3:
SAHV_0924
Mu50:
SAV0929
MW2:
MW0811
RF122:
SAB0795
ST398:
SAPIG0912
T0131:
SAT0131_00959
TCH60:
HMPREF0772_12318 (pdxp)
TW20:
SATW20_09290
USA300_TCH1516:
USA300HOU_0889
VC40:
SAVC_03820
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
N315 MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
NCTC8325 MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
Newman MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
USA300_FPR3757 MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
************************************************************
COL HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
N315 HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
NCTC8325 HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
Newman HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
USA300_FPR3757 HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
************************************************************
COL LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
N315 LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
NCTC8325 LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
Newman LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
USA300_FPR3757 LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
************************************************************
COL GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
N315 GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
NCTC8325 GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
Newman GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
USA300_FPR3757 GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
************************************************************
COL VPPTYSFKDLNEAIAELEK
N315 VPPTYSFKDLNEAIAELEK
NCTC8325 VPPTYSFKDLNEAIAELEK
Newman VPPTYSFKDLNEAIAELEK
USA300_FPR3757 VPPTYSFKDLNEAIAELEK
*******************