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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003026000
- symbol?: —
- synonym:
- description?: DUF86 domain-containing protein
- DUF86 domain-containing protein
- putative DUF86-containing protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3418094..3418528
- synteny block?: BlockID0021340
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0883
08BA02176:
C248_0927
11819-97:
MS7_0883
6850:
RSAU_000806
71193:
ST398NM01_0911
ECT-R 2:
ECTR2_784
ED133:
SAOV_0874
ED98:
SAAV_0888
HO 5096 0412:
SAEMRSA15_07580
JH1:
SaurJH1_0946
JH9:
SaurJH9_0927
JKD6008:
SAA6008_00879
JKD6159:
SAA6159_00787
LGA251:
SARLGA251_08460
M013:
M013TW_0847
MRSA252:
SAR0890
MSHR1132:
SAMSHR1132_07800
MSSA476:
SAS0798
Mu3:
SAHV_0923
Mu50:
SAV0928
MW2:
MW0810
RF122:
SAB0794
ST398:
SAPIG0911
T0131:
SAT0131_00958
TCH60:
HMPREF0772_12319
TW20:
SATW20_09280
USA300_TCH1516:
USA300HOU_0888
VC40:
SAVC_03815
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESSVDIGNMIIDAFILRDP
N315 MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESSVDIGNMIIDAFILRDP
NCTC8325 MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESSVDIGNMIIDAFILRDP
Newman MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESSVDIGNMIIDAFILRDP
USA300_FPR3757 MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESSVDIGNMIIDAFILRDP
************************************************************
COL GNYKDVIDILELENVITKETQQAINKTVGIRKQFTYDYTALDIKIIMPMFDDALPYYKQF
N315 GNYKDVIDILELENVITKETQQEINKTVDIRKQFTYDYTALDIKVIMPMFDDALPYYKQF
NCTC8325 GNYKDVIDILELENVITKETQQAINKTVGIRKQFTYDYTALDIKIIMPMFDDALPYYKQF
Newman GNYKDVIDILELENVITKETQQAINKTVGIRKQFTYDYTALDIKIIMPMFDDALPYYKQF
USA300_FPR3757 GNYKDVIDILELENVITKETQQAINKTVGIRKQFTYDYTALDIKIIMPMFDDALPYYKQF
********************** *****.***************:***************
COL ITEVTTFLHQENVPVTAFGKGENQ
N315 ITEVTIFLHQENVPVTAFGKGENQ
NCTC8325 ITEVTIFLHQENVPVTAFGKGENQ
Newman ITEVTTFLHQENVPVTAFGKGENQ
USA300_FPR3757 ITEVTTFLHQENVPVTAFGKGENQ
***** ******************