PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002897000
• symbol^?: sufS
• synonym:
• description^?: aminotransferase

  descriptions from strain specific annotations:

  • aminotransferase
  • cysteine desulfurase
  • SufS subfamily cysteine desulfurase
  • cysteine desulfurase SufS subfamily protein
  • putative cysteine desulfurase, putative
  • cysteine desulfurase, SufS subfamily
  • aminotransferase NifS homologue
  • aminotransferase NifS-like protein
  • cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL)
  • cysteine desulfurases, SufS subfamily subfamily
  • putative cysteine desulfurase
  • putative selenocysteine lyase
  • selenocysteine lyase
• strand^?: +
• coordinates^?: 3341724..3342974
• synteny block^?: BlockID0020630
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0916
N315:
SA0776
NCTC8325:
SAOUHSC_00849
Newman:
NWMN_0787 (sufS)
USA300_FPR3757:
SAUSA300_0820 (sufS)
04-02981:
SA2981_0799 (nifS)
08BA02176:
C248_0913 (csdB)
11819-97:
MS7_0871 (csd)
6850:
RSAU_000794 (sufS)
71193:
ST398NM01_0899
ECT-R 2:
ECTR2_771 (sufS)
ED133:
SAOV_0861
ED98:
SAAV_0815
HO 5096 0412:
SAEMRSA15_07460 (csdB)
JH1:
SaurJH1_0861
JH9:
SaurJH9_0845
JKD6008:
SAA6008_00866 (sufS)
JKD6159:
SAA6159_00775 (sufS)
LGA251:
SARLGA251_07730 (csdB)
M013:
M013TW_0836
MRSA252:
SAR0878 (csdB)
MSHR1132:
SAMSHR1132_07680
MSSA476:
SAS0786
Mu3:
SAHV_0840
Mu50:
SAV0844
MW2:
MW0797
RF122:
SAB0776 (csdB)
ST398:
SAPIG0899
T0131:
SAT0131_00943
TCH60:
HMPREF0772_12332 (sufS)
TW20:
SATW20_09160 (csdB)
USA300_TCH1516:
USA300HOU_0873 (sufS)
VC40:
SAVC_03755

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNV
  N315            ---MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPMQVLNVLEDYYKRYNSNV
  NCTC8325        MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNV
  Newman          MNEVAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNV
  USA300_FPR3757  ---MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNV
                     :**************************************:*****************
  
  COL             HRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGD
  N315            HRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGD
  NCTC8325        HRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGD
  Newman          HRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGD
  USA300_FPR3757  HRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGD
                  ************************************************************
  
  COL             EIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHIS
  N315            EIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHIS
  NCTC8325        EIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHIS
  Newman          EIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHIS
  USA300_FPR3757  EIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHIS
                  ************************************************************
  
  COL             NVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIG
  N315            NVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIG
  NCTC8325        NVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIG
  Newman          NVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIG
  USA300_FPR3757  NVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIG
                  ************************************************************
  
  COL             VLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLE
  N315            VLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLE
  NCTC8325        VLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLE
  Newman          VLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLE
  USA300_FPR3757  VLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLE
                  ************************************************************
  
  COL             RIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDT
  N315            RIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDT
  NCTC8325        RIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDT
  Newman          RIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDT
  USA300_FPR3757  RIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDT
                  ************************************************************
  
  COL             EGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF
  N315            EGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDIDQLINALKQTKEFFSYEF
  NCTC8325        EGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF
  Newman          EGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF
  USA300_FPR3757  EGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF
                  *************************************:******************