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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002716000
- symbol?: tmRNA
- synonyms: S329, ssrA
- description?: transfer-messenger RNA
- transfer-messenger RNA
- 10Sa RNA (tmRNA)
- sRNA
- tmRNA SsrA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3206029..3206358
- synteny block?: BlockID0019480
- occurrence?: in 42% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_miscRNA0009
JH1:
—
JH9:
SaurJH9_R0024 (ssrA)
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SARs006 (tmRNA)
MSHR1132:
—
MSSA476:
SASs006 (tmRNA)
Mu3:
SAHV_tm0001
Mu50:
SAVtmRNA01 (tmRNA)
MW2:
MWtmRNA01
RF122:
—
ST398:
—
T0131:
—
TCH60:
HMPREF0772_nc10038
TW20:
—
USA300_TCH1516:
USA300HOU_nc0003 (ssrA)
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: