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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002711000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3201404..3201877
- synteny block?: BlockID0019430
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0755
08BA02176:
C248_0868
11819-97:
MS7_0828
6850:
RSAU_000755
71193:
ST398NM01_0856
ECT-R 2:
ECTR2_728
ED133:
SAOV_0819
ED98:
SAAV_0743
HO 5096 0412:
SAEMRSA15_07040
JH1:
SaurJH1_0818
JH9:
SaurJH9_0802
JKD6008:
SAA6008_00792
JKD6159:
SAA6159_00734
LGA251:
SARLGA251_07110
M013:
M013TW_0768
MRSA252:
SAR0833
MSHR1132:
SAMSHR1132_07230
MSSA476:
SAS0743
Mu3:
SAHV_0774
Mu50:
SAV0777
MW2:
MW0739
RF122:
SAB0733
ST398:
SAPIG0856
T0131:
SAT0131_00850
TCH60:
HMPREF0772_12401
TW20:
SATW20_08520
USA300_TCH1516:
USA300HOU_0807
VC40:
SAVC_03530
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLNLTNQNTSDKAIDYILN
N315 MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLNLTNQNTSDKAIDYILN
NCTC8325 MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLNLTNQNTSDKAIDYILN
Newman MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLNLTNQNTSDKAIDYILN
USA300_FPR3757 MADRTNKEIKTGRFIATASIVFSILLIIHYFVSLDNATAKALLNLTNQNTSDKAIDYILN
************************************************************
COL SFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFTLINLSITIQAIKAAHGAY
N315 SFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFTLINLSITIQAIKAAHGAY
NCTC8325 SFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFTLINLSITIQAIKAAHGAY
Newman SFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFTLINLSITIQAIKAAHGAY
USA300_FPR3757 SFRFTGIMYILAYLAGFITFWNRHTYVWWFMFAVYVSNSLFTLINLSITIQAIKAAHGAY
************************************************************
COL LTLPILIVIIGSVALAIYMLVVSIKRKSTFNR
N315 LTLPILIVIIGSVALAIYMLVVSIKRKSTFNR
NCTC8325 LTLPILIVIIGSVALAIYMLVVSIKRKSTFNR
Newman LTLPILIVIIGSVALAIYMLVVSIKRKSTFNR
USA300_FPR3757 LTLPILIVIIGSVALAIYMLVVSIKRKSTFNR
********************************