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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002707000
- symbol?: pgk
- synonym:
- description?: phosphoglycerate kinase
- strand?: +
- coordinates?: 3196032..3197222
- synteny block?: BlockID0019390
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0751 (pgk)
08BA02176:
C248_0864 (pgk)
11819-97:
MS7_0824 (pgk)
6850:
RSAU_000751 (pgk)
71193:
ST398NM01_0852
ECT-R 2:
ECTR2_724
ED133:
SAOV_0815
ED98:
SAAV_0739 (pgk)
HO 5096 0412:
SAEMRSA15_07000 (pgk)
JH1:
SaurJH1_0814 (pgk)
JH9:
SaurJH9_0798 (pgk)
JKD6008:
SAA6008_00788 (pgk)
JKD6159:
SAA6159_00730 (pgk)
LGA251:
SARLGA251_07070 (pgk)
M013:
M013TW_0764
MRSA252:
SAR0829 (pgk)
MSHR1132:
SAMSHR1132_07190
MSSA476:
SAS0739 (pgk)
Mu3:
SAHV_0770 (pgk)
Mu50:
SAV0773 (pgk)
MW2:
MW0735 (pgk)
RF122:
SAB0729 (pgk)
ST398:
SAPIG0852 (pgk)
T0131:
SAT0131_00845
TCH60:
HMPREF0772_12405 (pgk)
TW20:
SATW20_08480 (pgk)
USA300_TCH1516:
USA300HOU_0803 (pgk)
VC40:
SAVC_03510 (pgk)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL
N315 MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL
NCTC8325 MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL
Newman MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL
USA300_FPR3757 MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL
************************************************************
COL GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY
N315 GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY
NCTC8325 GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY
Newman GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY
USA300_FPR3757 GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY
************************************************************
COL EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI
N315 EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI
NCTC8325 EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI
Newman EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI
USA300_FPR3757 EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI
************************************************************
COL KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI
N315 KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI
NCTC8325 KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI
Newman KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI
USA300_FPR3757 KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI
************************************************************
COL SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN
N315 SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN
NCTC8325 SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN
Newman SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN
USA300_FPR3757 SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN
************************************************************
COL TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI
N315 TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI
NCTC8325 TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI
Newman TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI
USA300_FPR3757 TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI
************************************************************
COL SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
N315 SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
NCTC8325 SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
Newman SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
USA300_FPR3757 SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
************************************