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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002660000
- symbol?: comFC
- synonym:
- description?: competence protein ComF
- competence protein ComF
- ComF family protein
- ComF operon protein 3-like amidophosphoribosyltransferase, putative
- ComF operon protein 3
- ComF operon protein C
- competence protein F
- late competence operon protein FC
- phosphoribosyl transferase domain protein
- putative amidophosphoribosyltransferase, ComFC
- superfamily II DNA/RNA helicase ComFC
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3157035..3157712
- synteny block?: BlockID0018950
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0729
08BA02176:
C248_0838
11819-97:
MS7_0801
6850:
RSAU_000726 (comFC)
71193:
ST398NM01_0827
ECT-R 2:
ECTR2_701
ED133:
SAOV_0788
ED98:
SAAV_0713
HO 5096 0412:
SAEMRSA15_06770
JH1:
SaurJH1_0792
JH9:
SaurJH9_0775
JKD6008:
SAA6008_00766 (comFC)
JKD6159:
SAA6159_00706 (comFC)
LGA251:
SARLGA251_06840
M013:
M013TW_0738
MRSA252:
SAR0805
MSHR1132:
SAMSHR1132_06960
MSSA476:
SAS0716
Mu3:
SAHV_0748
Mu50:
SAV0751
MW2:
MW0713
RF122:
SAB0703 (comFC)
ST398:
SAPIG0827
T0131:
SAT0131_00823
TCH60:
HMPREF0772_12431 (comF)
TW20:
SATW20_08260
USA300_TCH1516:
USA300HOU_0778
VC40:
SAVC_03390
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKARRCSRCLKHLNQDEAY
N315 MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKARRCSRCLKHLNQDEAY
NCTC8325 MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKARRCSRCLKHLNQDEAY
Newman MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKARRCSRCLKHLNQDEAY
USA300_FPR3757 MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKARRCSRCLKHLNQDEAY
************************************************************
COL CLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYLCELLAHLIEIPQTSYDYI
N315 CLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYLCELLAHLIEIPQTSYDYI
NCTC8325 CLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYLCELLAHLIEIPQTSYDYI
Newman CLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYLCELLAHLIEIPQTSYDYI
USA300_FPR3757 CLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFLKDYYLCELLAHLIEIPQTSYDYI
************************************************************
COL VPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPKQSHLTKKERLADENPFIIDT
N315 VPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPKQSHLTKKERLADENPFIIDT
NCTC8325 VPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPKQSHLTKKERLADENPFIIDT
Newman VPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPKQSHLTKKERLADENPFIIDT
USA300_FPR3757 VPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPKQSHLTKKERLADENPFIIDT
************************************************************
COL ELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFKVFAFAR
N315 ELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFKVFAFAR
NCTC8325 ELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFKVFAFAR
Newman ELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFKVFAFAR
USA300_FPR3757 ELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFKVFAFAR
********************************************