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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002557000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- DUF456 domain-containing protein
- putative glycine-zipper protein
- membrane protein , putative
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3070432..3070899
- synteny block?: BlockID0017930
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0651
08BA02176:
C248_0759
11819-97:
MS7_0726
6850:
RSAU_000650
71193:
ST398NM01_0752
ECT-R 2:
ECTR2_626
ED133:
SAOV_0709
ED98:
SAAV_0637
HO 5096 0412:
SAEMRSA15_06000
JH1:
SaurJH1_0714
JH9:
SaurJH9_0698
JKD6008:
SAA6008_00691
JKD6159:
SAA6159_00629
LGA251:
SARLGA251_06070
M013:
M013TW_0661
MRSA252:
—
MSHR1132:
SAMSHR1132_06200
MSSA476:
SAS0639
Mu3:
SAHV_0671
Mu50:
SAV0674
MW2:
MW0636
RF122:
SAB0623
ST398:
SAPIG0752
T0131:
SAT0131_00745
TCH60:
HMPREF0772_12514
TW20:
SATW20_07490
USA300_TCH1516:
USA300HOU_0697
VC40:
SAVC_03000
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHNQHLSWVFYVSMALLTI
N315 MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHNQHLSWVFYVSMALLTI
NCTC8325 MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHNQHLSWVFYVSMALLTI
Newman MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHNQHLSWVFYVSMALLTI
USA300_FPR3757 MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHNQHLSWVFYVSMALLTI
************************************************************
COL LILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFGIIIIPFILVFIVELIQGY
N315 LILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFGIIIIPFILVFIVELIQGY
NCTC8325 LILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFGIIIIPFILVFIVELIQGY
Newman LILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFGIIIIPFILVFIVELIQGY
USA300_FPR3757 LILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFGIIIIPFILVFIVELIQGY
************************************************************
COL SFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALLIN
N315 SFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALLIN
NCTC8325 SFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALLIN
Newman SFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALLIN
USA300_FPR3757 SFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALLIN
******************************************