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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002550000
- symbol?: —
- synonym:
- description?: cupin
- cupin
- putative Cupin superfamily protein
- cupin superfamily protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3065367..3065840
- synteny block?: BlockID0017860
- occurrence?: in 88% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0754
11819-97:
MS7_0720
6850:
RSAU_000646
71193:
ST398NM01_0748
ECT-R 2:
ECTR2_621
ED133:
SAOV_0704
ED98:
SAAV_0632
HO 5096 0412:
SAEMRSA15_05960
JH1:
SaurJH1_0709
JH9:
SaurJH9_0694
JKD6008:
SAA6008_00686
JKD6159:
SAA6159_00624
LGA251:
SARLGA251_06030
M013:
M013TW_0657
MRSA252:
SAR0681
MSHR1132:
SAMSHR1132_06160
MSSA476:
SAS0635
Mu3:
—
Mu50:
—
MW2:
MW0632
RF122:
SAB0619
ST398:
SAPIG0748
T0131:
SAT0131_00740
TCH60:
HMPREF0772_12518
TW20:
SATW20_07450
USA300_TCH1516:
USA300HOU_0691
VC40:
SAVC_02980
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSAEQWIDELQLESHPEGGFYRETIREVLKDGRRAPFSSIYFLLTDDNISHFHRIDADE
NCTC8325 MKSAEQWIDELQLESHPEGGFYRETIREVLKDGRRAPFSSIYFLLTDDNISHFHRIDADE
Newman MKSAEQWIDELQLESHPEGGFYRETIREVLKDGRRAPFSSIYFLLTDDNISHFHRIDADE
USA300_FPR3757 MKSAEQWIDELQLESHPEGGFYRETIREVLKDGRRAPFSSIYFLLTDDNISHFHRIDADE
************************************************************
COL VWYYHAGDSLTIHMINPDGEYTTATLGTDIQNGDVLQYVVPKGTIFASSIEISNTFSLVG
NCTC8325 VWYYHAGDSLTIHMINPDGEYTTATLGTDIQNGDVLQYVVPKGTIFASSIEISNTFSLVG
Newman VWYYHAGDSLTIHMINPDGEYTTATLGTDIQNGDVLQYVVPKGTIFASSIEISNTFSLVG
USA300_FPR3757 VWYYHAGDSLTIHMINPDGEYTTATLGTDIQNGDVLQYVVPKGTIFASSIEISNTFSLVG
************************************************************
COL CMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK
NCTC8325 CMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK
Newman CMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK
USA300_FPR3757 CMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK
*************************************