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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002354000
- symbol?: vraC
- synonym:
- description?: protein VraC
- protein VraC
- VraC protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2894125..2894490
- synteny block?: BlockID0016530
- occurrence?: in 100% of 33 strains
Suggest pan-symbol of "vraC" and description of "vancomycin-responsive transcriptional activator" to harmonize with PMID 33948657
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0554 (vraC)
08BA02176:
C248_0652
11819-97:
MS7_0566 (vraC)
6850:
RSAU_000530 (vraC)
71193:
ST398NM01_0651
ECT-R 2:
ECTR2_530
ED133:
SAOV_0611
ED98:
SAAV_0539
HO 5096 0412:
SAEMRSA15_05040
JH1:
SaurJH1_0614
JH9:
SaurJH9_0600
JKD6008:
SAA6008_00584
JKD6159:
SAA6159_00530
LGA251:
SARLGA251_05120
M013:
M013TW_0564
MRSA252:
SAR0582
MSHR1132:
SAMSHR1132_05200
MSSA476:
SAS0535
Mu3:
SAHV_0575 (vraC)
Mu50:
SAV0577 (vraC)
MW2:
MW0532 (vraC)
RF122:
SAB0527
ST398:
SAPIG0651
T0131:
SAT0131_00637 (glnQ)
TCH60:
HMPREF0772_12612
TW20:
SATW20_06460
USA300_TCH1516:
USA300HOU_0570
VC40:
SAVC_02470
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASLWPKFDLFKKYANSELI
N315 MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASLWPKFDLFKKYANSELI
NCTC8325 MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASLWPKFDLFKKYANSELI
Newman MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASLWPKFDLFKKYANSELI
USA300_FPR3757 MQHYLLDSNQRLNVSFSKDSVAAYYQCFNQPYRKEVPPLMCASLWPKFDLFKKYANSELI
************************************************************
COL LTKSAINQTQKIEVDTIYVGHLEDIECRQTRNITRYTMALTLTKNDQHVITVTQTFIKAM
N315 LTKSAINQTQKIEVDTIYVGHLEDIECRQTRNITRYTMALTLTKNDQHVITVTQTFIKAM
NCTC8325 LTKSAINQTQKIEVDTIYVGHLEDIECRQTRNITRYTMALTLTKNDQHVITVTQTFIKAM
Newman LTKSAINQTQKIEVDTIYVGHLEDIECRQTRNITRYTMALTLTKNDQHVITVTQTFIKAM
USA300_FPR3757 LTKSAINQTQKIEVDTIYVGHLEDIECRQTRNITRYTMALTLTKNDQHVITVTQTFIKAM
************************************************************
COL K
N315 K
NCTC8325 K
Newman K
USA300_FPR3757 K
*