PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002318000
• symbol^?: rpsG
• synonym:
• description^?: 30S ribosomal protein S7

  descriptions from strain specific annotations:

  • 30S ribosomal protein S7
  • 30S ribosomalprotein S7p (S5e)
• strand^?: +
• coordinates^?: 2835984..2836455
• synteny block^?: BlockID0016170
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0592 (rpsG)
N315:
SA0504 (rpsG)
NCTC8325:
SAOUHSC_00528
Newman:
NWMN_0508 (rpsG)
USA300_FPR3757:
SAUSA300_0531
04-02981:
SA2981_0523 (rpsG)
08BA02176:
C248_0621 (rpsG)
11819-97:
MS7_0536 (rpsG)
6850:
RSAU_000498 (rpsG)
71193:
ST398NM01_0621
ECT-R 2:
ECTR2_500 (rpsG)
ED133:
SAOV_0581 (rpsG)
ED98:
SAAV_0509 (rpsG)
HO 5096 0412:
SAEMRSA15_04730 (rpsG)
JH1:
SaurJH1_0583
JH9:
SaurJH9_0569
JKD6008:
SAA6008_00552 (rpsG)
JKD6159:
SAA6159_00500 (rpsG)
LGA251:
SARLGA251_04820 (rpsG)
M013:
M013TW_0533
MRSA252:
SAR0551 (rpsG)
MSHR1132:
SAMSHR1132_04900
MSSA476:
SAS0504
Mu3:
SAHV_0544 (rpsG)
Mu50:
SAV0546 (rpsG)
MW2:
MW0501 (rpsG)
RF122:
SAB0497 (rpsG)
ST398:
SAPIG0621 (rpsG)
T0131:
SAT0131_00599 (hemH)
TCH60:
HMPREF0772_12643 (rpsG)
TW20:
SATW20_06160 (rpsG)
USA300_TCH1516:
USA300HOU_0540 (rpsG)
VC40:
SAVC_02320

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALE
  N315            MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALE
  NCTC8325        MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALE
  Newman          MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALE
  USA300_FPR3757  ------------------------------MLDGKRGTAQRILYSAFDLVEQRSGRDALE
                                                ******************************
  
  COL             VFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRL
  N315            VFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRL
  NCTC8325        VFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRL
  Newman          VFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRL
  USA300_FPR3757  VFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRL
                  ************************************************************
  
  COL             ANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
  N315            ANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
  NCTC8325        ANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
  Newman          ANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
  USA300_FPR3757  ANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
                  ************************************