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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002317000
- symbol?: rpsL
- synonym:
- description?: 30S ribosomal protein S12
- 30S ribosomal protein S12
- 30S ribosomalprotein S12p (S23e)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2835469..2835918
- synteny block?: BlockID0016160
- occurrence?: in 100% of 34 strains
rpsL : 30S ribosomal protein S12 [1]
• Two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S12 is also known as "uS12" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0522 (rpsL)
08BA02176:
C248_0620 (rpsL)
11819-97:
MS7_0535 (rpsL)
6850:
RSAU_000497 (rpsL)
71193:
ST398NM01_0620
ECT-R 2:
ECTR2_499 (rpsL)
ED133:
SAOV_0580
ED98:
SAAV_0508 (rpsL)
HO 5096 0412:
SAEMRSA15_04720 (rpsL)
JH1:
SaurJH1_0582 (rpsL)
JH9:
SaurJH9_0568 (rpsL)
JKD6008:
SAA6008_00551 (rpsL)
JKD6159:
SAA6159_00499 (rpsL)
JSNZ:
JSNZ_000503 (rpsL)
LGA251:
SARLGA251_04810 (rpsL)
M013:
M013TW_0532
MRSA252:
SAR0550 (rpsL)
MSHR1132:
SAMSHR1132_04890
MSSA476:
SAS0503 (rpsL)
Mu3:
SAHV_0543 (rpsL)
Mu50:
SAV0545 (rpsL)
MW2:
MW0500 (rpsL)
RF122:
SAB0496 (rpsL)
ST398:
SAPIG0620 (rpsL)
T0131:
SAT0131_00598
TCH60:
HMPREF0772_12644 (rpsL)
TW20:
SATW20_06150 (rpsL)
USA300_TCH1516:
USA300HOU_0539 (rpsL)
VC40:
SAVC_02315 (rpsL)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPRKPNS
N315 MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNS
NCTC8325 MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNS
Newman MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNS
USA300_FPR3757 MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNS
*******************************************************:****
COL ALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVRDLPGVRYHIVRGALDTSGV
N315 ALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGV
NCTC8325 ALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGV
Newman ALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGV
USA300_FPR3757 ALRKYARVRLSNNIEINAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGV
****************************************:*******************
COL DGRRQGRSLYGTKKPKN
N315 DGRRQGRSLYGTKKPKN
NCTC8325 DGRRQGRSLYGTKKPKN
Newman DGRRQGRSLYGTKKPKN
USA300_FPR3757 DGRRQGRSLYGTKKPKN
*****************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)