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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002305000
- symbol?: nusG
- synonym:
- description?: transcription antitermination protein
- transcription antitermination protein
- transcription termination/antitermination protein NusG
- transcription antitermination protein NusG
- transcription termination/antitermination factor NusG
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2823453..2824001
- synteny block?: BlockID0016040
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0512 (nusG)
08BA02176:
C248_0610 (nusG)
11819-97:
MS7_0526 (nusG)
6850:
RSAU_000488 (nusG)
71193:
ST398NM01_0611
ECT-R 2:
ECTR2_490 (nusG)
ED133:
SAOV_0571
ED98:
SAAV_0498 (nusG)
HO 5096 0412:
SAEMRSA15_04630 (nusG)
JH1:
SaurJH1_0573
JH9:
SaurJH9_0559
JKD6008:
SAA6008_00542 (nusG)
JKD6159:
SAA6159_00489 (nusG)
LGA251:
SARLGA251_04720 (nusG)
M013:
M013TW_0521
MRSA252:
SAR0540 (nusG)
MSHR1132:
SAMSHR1132_04800
MSSA476:
SAS0494
Mu3:
SAHV_0533 (nusG)
Mu50:
SAV0535 (nusG)
MW2:
MW0491 (nusG)
RF122:
SAB0487 (nusG)
ST398:
SAPIG0611 (nusG)
T0131:
SAT0131_00588 (bsaC)
TCH60:
HMPREF0772_12653 (nusG)
TW20:
SATW20_06060 (nusG)
USA300_TCH1516:
USA300HOU_0530 (nusG)
VC40:
SAVC_02270
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKT
N315 MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKT
NCTC8325 MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKT
Newman MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKT
USA300_FPR3757 MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKT
************************************************************
COL TVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGL
N315 TVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGL
NCTC8325 TVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGL
Newman TVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGL
USA300_FPR3757 TVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGL
************************************************************
COL KEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLTVLVDMFGRETPVEVEFDQIE
N315 KEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLTVLVDMFGRETPVEVEFDQIE
NCTC8325 KEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLTVLVDMFGRETPVEVEFDQIE
Newman KEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLTVLVDMFGRETPVEVEFDQIE
USA300_FPR3757 KEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLTVLVDMFGRETPVEVEFDQIE
************************************************************
COL KL
N315 KL
NCTC8325 KL
Newman KL
USA300_FPR3757 KL
**