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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002190000
- symbol?: treP
- synonym:
- description?: PTS ascorbate transporter subunit IIA
- PTS ascorbate transporter subunit IIA
- PTS system, trehalose-specific IIBC component
- PTS system, IIBC components
- PTS system trehalose-specific EIIBC component
- PTS trehalose-specific transporter subunit II
- sugar-specific PTS transport system, IIBC component
- phosphoenolpyruvate-dependent and trehalose-specific PTS enzyme II
- pseudogene
- PTS family trehalose (tre) porter component IIBC
- PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component
- PTS system sugar-specific transporter subunit IIBC
- PTS system transporter subunit IIBC
- PTS system trehalose-specific IIBC component
- PTS system trehalose-specific transporter subunit IIBC
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2696302..2697739
- synteny block?: BlockID0014910
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0449 (treP)
08BA02176:
C248_0524
11819-97:
MS7_0448 (treP)
6850:
RSAU_000408 (treP)
71193:
ST398NM01_0540
ECT-R 2:
ECTR2_408 (treP)
ED133:
SAOV_0492
ED98:
SAAV_0417
HO 5096 0412:
SAEMRSA15_03990
JH1:
SaurJH1_0508
JH9:
SaurJH9_0495
JKD6008:
SAA6008_00478
JKD6159:
SAA6159_00423
LGA251:
SARLGA251_04070
M013:
M013TW_0439
MRSA252:
SAR0473
MSHR1132:
SAMSHR1132_04180
MSSA476:
SAS0431
Mu3:
SAHV_0471 (treP)
Mu50:
SAV0474 (treP)
MW2:
MW0428 (treP)
RF122:
SAB0423
ST398:
SAPIG0540 (treP)
T0131:
SAT0131_00515
TCH60:
HMPREF0772_10048 (treP)
TW20:
SATW20_05420
USA300_TCH1516:
USA300HOU_0474 (treP)
VC40:
SAVC_01955
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MAVKREDVKAIVTAIGGKENLEAATHCVTRLRLVLKDESKVDKDALSNNALVKGQFK
N315 ---MAVKREDVKAIVSAIGGKENLEAATHCVTRLRLVLKDESKVDKDALSNNALVKGQFK
NCTC8325 ---MAVKREDVKAIVTAIGGKENLEAATHCVTRLRLVLKDESKVDKDALSNNALVKGQFK
Newman MKYMAVKREDVKAIVTAIGGKENLEAATHCVTRLRLVLKDESKVDKDALSNNALVKGQFK
USA300_FPR3757 ---MAVKREDVKAIVTAIGGKENLEAATHCVTRLRLVLKDESKVDKDALSNNALVKGQFK
************:********************************************
COL ADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAQKGNPVQRLIKLLGDIFIPI
N315 ADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAKKGNPVQRLIKLLGDIFIPI
NCTC8325 ADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAQKGNPVQRLIKLLGDIFIPI
Newman ADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAQKGNPVQRLIKLLGDIFIPI
USA300_FPR3757 ADHQYQIVIGPGTVDEVYKQFIDETGAQEASKDEAKQAAAQKGNPVQRLIKLLGDIFIPI
****************************************:*******************
COL LPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIINVIASTAFIFLPALIGWS
N315 LPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIINVIASTAFIFLPALIGWS
NCTC8325 LPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIINVIASTAFIFLPALIGWS
Newman LPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIINVIASTAFIFLPALIGWS
USA300_FPR3757 LPAIVTAGLLMGINNLLTMKGLFGPKALIEMYPQIADISNIINVIASTAFIFLPALIGWS
************************************************************
COL SMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLFGLEIKQLNYQGQVLPVLIA
N315 SMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLFGLEIKQLNYQGQVLPVLIA
NCTC8325 SMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLFGLEIKQLNYQGQVLPVLIA
Newman SMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLFGLEIKQLNYQGQVLPVLIA
USA300_FPR3757 SMRVFGGSPILGIVLGLILMHPQLVSQYDLAKGNIPTWNLFGLEIKQLNYQGQVLPVLIA
************************************************************
COL AYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFIIIGPVALLIGTGITSGVTFIFQ
N315 AYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFIIIGPVALLIGTGITSGVTFIFQ
NCTC8325 AYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFIIIGPVALLIGTGITSGVTFIFQ
Newman AYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFIIIGPVALLIGTGITSGVTFIFQ
USA300_FPR3757 AYVLAKIEKGLNKVVHDSIKMLVVGPVALLVTGFLAFIIIGPVALLIGTGITSGVTFIFQ
************************************************************
COL HAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSSLGGTYLWPIVAISNICQGSAAFG
N315 HAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSSLGGTYLWPIVAISNICQGSAAFG
NCTC8325 HAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSSLGGTYLWPIVAISNICQGSAAFG
Newman HAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSSLGGTYLWPIVAISNICQGSAAFG
USA300_FPR3757 HAGWLGGAIYGLLYAPLVITGLHHMFLAVDFQLMGSSLGGTYLWPIVAISNICQGSAAFG
************************************************************
COL AWFVYKRRKMVKEEGLALTSCISGMLGVTEPAMFGVNLPLKYPFIAAISTSCVLGAIVGM
N315 AWFVYKRRKMVKEEGLALTSCISAMLGVTEPAMFGVNLPLKYPFIAAISTSCVLGAIVGM
NCTC8325 AWFVYKRRKMVKEEGLALTSCISGMLGVTEPAMFGVNLPLKYPFIAAISTSCVLGAIVGM
Newman AWFVYKRRKMVKEEGLALTSCISGMLGVTEPAMFGVNLPLKYPFIAAISTSCVLGAIVGM
USA300_FPR3757 AWFVYKRRKMVKEEGLALTSCISGMLGVTEPAMFGVNLPLKYPFIAAISTSCVLGAIVGM
***********************.************************************
COL NNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIAIVVPCILTIVMSHFSKQKAKEIVED
N315 NNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIAIVVPCILTIVMSHFSKQKAKEIVED
NCTC8325 NNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIAIVVPCILTIVMSHFSKQKAKEIVED
Newman NNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIAIVVPCILTIVMSHFSKQKAKEIVED
USA300_FPR3757 NNVLGKVGVGGVPAFISIQKEFWPVYLIVTAIAIVVPCILTIVMSHFSKQKAKEIVED
**********************************************************